Cobetia sp. cqz5-12: F8A90_08130
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Entry
F8A90_08130 CDS
T10568
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobc01011
]
F8A90_08130
Enzymes [BR:
cobc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
F8A90_08130
Peptidoglycan biosynthesis and degradation proteins [BR:
cobc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
F8A90_08130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
LysM_RLK
LysM_OapA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QQK65896
LinkDB
All DBs
Position
complement(1904848..1906221)
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AA seq
457 aa
AA seq
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MAADTPCRVTPTQAPFRPARLRHLIRLASLGATLCLMPLTASANSAMVSGVSPSSEYQRA
PLNFMEAVDAIPARYDDVWERLRAGYQLQQDTGRPRVRKWISWYQEHPHHVERIAEQARP
WIRYVTLRTEARGLPAELALLPFIESAYDPDAAHPGGATGMWQFMPRTGDAMGLTRNRWY
DGRKDVLLSTDAALDYLETQGERWYDGDWELALAAYNAGAGTVNRARRRAGGDEDYWNIK
LPNETMEYVPKLLALAAVIRDPEEYGLSLPKIDDRPEIAAVETGGQLDLSTAAELAGISE
DELRALNPAYKRWATTPGDSSLVIPATARDTFLSQLATLPEEARQSWASYRVKRGDTLSV
IARRNGLTLSELKQKNRLSGNTIRIGQALMVPDRGASVATQLASANGEKKVRVKSGDSLS
LIAARHNVSTRQLARWNKLSSADYLRPGQMLTLYSVN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacacgccgtgtcgtgtcactccgacccaggcccccttccgtccggctcga
ctgcgtcacctgattcgcctcgcctctctgggcgctaccctgtgcctgatgccgctgacc
gccagcgccaattcagcaatggtgtccggggtctcgcccagcagtgagtatcagcgagcc
ccactgaacttcatggaggccgtcgacgccattcccgcacgctacgacgacgtctgggag
cgcctgcgcgccggctatcaactccagcaggacaccggtcgtccacgcgtgcgcaaatgg
atcagctggtatcaggaacacccccaccacgtggagcgtatcgcggaacaggcccgcccc
tggattcggtacgtgacactgcgtaccgaagcacgtggcctgccggcagaactggcactg
ctgcccttcatcgagagcgcctacgatccggacgccgcgcatccgggcggtgcgactggc
atgtggcagttcatgccgcgcaccggtgacgccatggggctgacacgcaaccgctggtat
gacggtcgcaaggatgtgttgctgtccacggatgccgcactggattacctggagacccag
ggcgagcgctggtatgacggcgactgggagctggcgctggccgcctacaatgccggtgcc
ggcaccgtgaaccgcgcacgccgccgcgccggtggcgatgaagattactggaacatcaag
ctgcccaacgagaccatggaatacgtgccgaagcttctggcactggccgcggtgattcgc
gaccctgaagaatatgggctttcgcttccgaagattgacgacagaccggaaatcgcggcc
gtcgagacgggcggacagctggacctgtccaccgccgccgagcttgccggcatcagtgaa
gatgagctgcgcgccctgaacccggcttacaagcgctgggccaccacacccggtgacagc
tcgctggtcattcccgccaccgcccgcgacaccttcctcagtcagctggcgacgctacct
gaggaagcgcgtcagagctgggccagctatcgtgtgaagcgcggcgataccctgtccgtc
atcgcacgccgcaatggcctgacgctgtccgagctgaagcagaagaatcgtctctcgggc
aacaccatccgcatcggccaggcattgatggtgccggaccgcggcgcctcggtggccacc
cagctggcctcggccaacggcgagaagaaggtgcgcgtgaagagtggcgactccctgtcc
ttgatcgccgcacgtcacaatgtcagcacccgacagctcgcgcgctggaacaagctgtca
tctgcggactatctgcgccccggtcagatgctgaccctttacagcgtcaactga
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