Cobetia sp. cqz5-12: F8A90_08655
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Entry
F8A90_08655 CDS
T10568
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc00061
Fatty acid biosynthesis
cobc00071
Fatty acid degradation
cobc01100
Metabolic pathways
cobc01212
Fatty acid metabolism
cobc02024
Quorum sensing
cobc04146
Peroxisome
Module
cobc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F8A90_08655
00071 Fatty acid degradation
F8A90_08655
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F8A90_08655
09145 Cellular community - prokaryotes
02024 Quorum sensing
F8A90_08655
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cobc01004
]
F8A90_08655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cobc04147
]
F8A90_08655
Enzymes [BR:
cobc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F8A90_08655
Lipid biosynthesis proteins [BR:
cobc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F8A90_08655
Exosome [BR:
cobc04147
]
Exosomal proteins
Exosomal proteins of breast milk
F8A90_08655
Exosomal proteins of breast cancer cells
F8A90_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QQK65909
LinkDB
All DBs
Position
2045734..2047398
Genome browser
AA seq
554 aa
AA seq
DB search
MSGMSCLRSSQEVDFSGYDSLMDMLEKACSAHGERPAFTCMDRTMTFAELDATSRQLADW
FQHETDLKPGDRVAIQLPNTLMFPVVAFAVLRAGLVLVNTNPLYTEREMEHQFNDSGARA
LVVLANMADKVERVRERTGLEYVLVCELGDMHPAFKRLLINTVVKHVKKLVPSYHLPDAI
ALRTAISQGKAERWERPTLALDDVAVLQYTGGTTGVAKGAMLTHRNLLANMLQGKMALTQ
GLNPGHETLVAPLPLYHIYAFTIHMACMLSEGNHTLLIPNPRDIPGFVKTLQKHDFTMFV
GLNTLFVALCNNPGFQALDFSKLKITTSGGVALTRKAAEEWKRITGSDISEGYGMTETSP
IVSFNPLDAIQLGTIGRPMPSTEVRLYDDEGALVAMGEPGELCVKGPQVMKGYWQREQAT
KDSFTADGFLRTGDIAVFQDDGYMRIVDRKKDMIIVSGFNVYPNEVEDVIVRHPDVLEAA
AVSVVDERSGEAIKLYVVLKDGAELEADALRDWSRKELASYKVPRQVVFIDELPKTNVGK
VLRRELRDSPPESA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatgtcgtgcctacggtcttctcaggaggtggatttcagcggctacgactcc
ctgatggacatgctggagaaggcctgctcggcgcatggcgagcgtcctgcctttacctgc
atggaccgcaccatgacctttgcggagctggatgccaccagtcgccagctggcggactgg
ttccagcatgagaccgacctcaagccgggcgatcgggtcgccatccagctgcccaatacg
ctgatgtttccggtggtcgccttcgccgtgctgcgagcaggcctggtgctggtgaatacc
aatccgctgtataccgaacgtgagatggagcatcagttcaatgattccggcgcacgggcg
ttggtggtgctggccaacatggcggacaaggtcgaacgcgtgcgggagcgcactggcctc
gagtacgtgctggtctgtgagttgggcgacatgcacccggccttcaagcggctattgatc
aacaccgtggtcaagcacgtcaagaaactggtgccgagttaccacctgcccgatgccatt
gcgctgcgcacggccatctcgcagggcaaggccgagcgctgggagcggccgacactggca
ctcgatgatgtcgctgtgctgcagtacaccggcggcaccaccggggtcgccaagggcgcg
atgctgacccaccgcaacctgctcgccaacatgctgcaaggcaagatggccctgacgcag
ggcttgaacccgggccatgagacgctggtggcgccgctgccgctctatcacatctacgcc
ttcaccattcatatggcctgcatgctcagtgaaggcaatcacaccctgttgatccccaat
ccgcgcgatatcccgggcttcgtcaagacgctgcaaaagcacgacttcacgatgttcgtc
ggtctcaatacgctgttcgtggcgctgtgcaacaatcccggcttccaggcactggacttc
tcgaagctcaagatcacgacctcggggggcgtggcgctgacgcgcaaggcggcagaagag
tggaagcggatcaccggcagtgatatctccgagggctacggcatgaccgagacctcaccg
atcgtgtcgttcaacccgctggatgccattcagctcggcaccatcggtcggcccatgccc
tccaccgaggtgcgcctgtatgacgatgagggtgcgctggtcgcgatgggggagccgggc
gagctgtgcgtgaaggggccgcaggtgatgaagggctactggcagcgtgagcaggcaacg
aaagacagcttcactgccgatggcttcctgcgcaccggtgatatcgcggtcttccaggac
gatggctatatgcgcatcgtcgatcgcaagaaggacatgatcatcgtctccggcttcaac
gtgtatcccaatgaggtcgaggacgtcatcgtgcgtcacccggacgtgcttgaggctgcc
gccgtctcggtggtggacgagcgcagtggtgaggcgatcaagctgtatgtcgtgctcaag
gacggcgcagagctcgaggcggacgcgctgcgagactggtcgcgcaaggaactggccagc
tacaaggtgccgcgtcaggtggtcttcattgatgagctacccaagaccaatgtcggcaag
gtgctcagacgtgagctgcgcgactcgccgccggaatctgcctga
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