Cobetia sp. cqz5-12: F8A90_09175
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Entry
F8A90_09175 CDS
T10568
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc02020
Two-component system
cobc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F8A90_09175
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F8A90_09175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobc03021
]
F8A90_09175
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cobc02035
]
F8A90_09175
Transcription machinery [BR:
cobc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F8A90_09175
Bacterial motility proteins [BR:
cobc02035
]
Flagellar system
Flagellar assembly proteins
Stator
F8A90_09175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
QQK64275
LinkDB
All DBs
Position
complement(2181763..2182521)
Genome browser
AA seq
252 aa
AA seq
DB search
MYTAKGRMAQQDIYTEYQPLVRRIALQLQVRLPASVDLEDLIQAGMLGLCECVGRYEQGH
GASFATYASQRIRGAMLDELRSRDWLPRSVRRAGRELESVIQQLEQSLGYPPEETQIAAV
MGLELEDYRRLLLDTNNGMVMSLDEMMDEEGGLAGGHASPEATPFTTPFALPHDALEEAD
TRRALNEAIARLPEREKLLMALYYQEKLNLKEIGAVLDVTESRVSQLHSQAVRRLQGVLA
PHLVARAGKRRR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgccaaagggcgcatggcccagcaggatatctacaccgagtatcagccgctg
gtgcgccggatcgcgctgcagttgcaggtgcgcttgccagcgagtgtcgatctcgaggat
ctgattcaggccggcatgttggggttgtgcgaatgcgtgggccgctatgagcagggccac
ggtgccagctttgccacctatgccagtcagcgcatccggggtgcgatgctcgatgagctg
cgctcgcgagactggttgccgcgcagtgtgcgccgggccgggcgcgagcttgagagcgtg
atccagcaactggagcagagcctgggctatccgcccgaggagacccagatcgccgctgtc
atggggcttgagctggaggattaccgacgcctgctgctggataccaacaatggcatggtg
atgtcgctggacgagatgatggatgaggaaggcgggctggcgggtggtcatgcctcgccc
gaggcgacgcccttcaccacgccgtttgccttgccgcatgatgcgctggaagaggccgat
acgcggcgggccttgaatgaggccatcgcgcggctgccggagcgcgagaagctgttgatg
gcgctctattatcaggagaagctcaacctcaaggagatcggcgcggtactcgatgtcacc
gaatcgcgtgtctcgcagctgcattcccaggccgtacgccgtctgcagggagtgctggcg
ccgcatctggtagcgcgggcgggcaagcgtcgccgctga
DBGET
integrated database retrieval system
