Cobetia sp. cqz5-12: F8A90_12655
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Entry
F8A90_12655 CDS
T10568
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F8A90_12655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobc02000
]
F8A90_12655
Transporters [BR:
cobc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
F8A90_12655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
HAM1_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QQK64882
LinkDB
All DBs
Position
3031135..3032154
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AA seq
339 aa
AA seq
DB search
MRKPNDSLTRKTPSVKSFAWLATVGALAFSGSALAAQWNLATPYGDASFHTKNTKQFAED
VTEATDGELTVTVHSGGSLISHGEIKPSVRRGTVQAGEIFLSILSNESPVYELDTLPGVA
SSYEEAFALWQASKPDITALFAKEGLMPLYAVAWPAQGIYTDFDLTDVSQLKGLRIRAPN
INTQRFVENVGGKPTETEEADIPTAFSTGRVDAMITSSSTGKSMSAWDYVKHYNDAKLWL
PKNIVFVNKRAFDRLDESTQQAVLDAAKAAETRGWEASKADAAESAKVLTEYGFTITEPD
AKLAEDLKAAGDKLFQDWKSRAGEEGQQLLERYRADLDA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagcccaacgattccctcactcgcaagaccccgtcagtcaagtccttcgcctgg
ctggcgacagtgggtgccctggccttcagtggctcggcactcgcggcacagtggaacctc
gccactccgtatggcgatgccagcttccacaccaagaacaccaagcagttcgccgaggac
gtcaccgaggctaccgatggcgagctgaccgtgaccgtgcacagcggcggttccctgatc
tcccacggcgagatcaagccttccgtgcgtcgcggcaccgtccaggccggtgagatcttc
ctgtcgattctctccaacgaatcgccggtctacgagctggacaccctgccgggcgtcgcc
tccagctacgaagaagccttcgccctctggcaggcctccaagccggacatcaccgcgctg
ttcgccaaggaaggtctgatgccgctgtacgcggtcgcctggccggcccagggtatctac
accgacttcgacctgaccgacgtctcccagctcaagggcctgcgtatccgcgcgcccaac
atcaacacccagcgtttcgtcgagaacgtcggcggcaagcccaccgagaccgaagaagcc
gacatccccaccgccttcagcaccggtcgtgtcgacgcgatgatcacctccagctccacc
ggcaagtccatgtcggcctgggattacgtcaagcactacaatgacgccaagctgtggctg
ccgaagaacatcgtcttcgtcaacaagcgtgccttcgatcgcctcgacgagagcacccag
caagccgtgctcgatgccgccaaggccgccgagacccgcggctgggaagccagcaaggcc
gatgccgccgagagcgccaaggtgctgaccgagtatggcttcaccatcacagagcctgac
gccaagctggccgaagacctgaaggccgccggtgacaagctgttccaggactggaagtcg
cgtgccggtgaagaaggccagcagctgctcgagcgctaccgcgcagacctggatgcctga
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