KEGG   Cobetia sp. cqz5-12: F8A90_13035
Entry
F8A90_13035       CDS       T10568                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
cobc  Cobetia sp. cqz5-12
Pathway
cobc00740  Riboflavin metabolism
cobc01100  Metabolic pathways
cobc01110  Biosynthesis of secondary metabolites
cobc01240  Biosynthesis of cofactors
cobc02024  Quorum sensing
Module
cobc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:cobc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    F8A90_13035 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F8A90_13035 (ribD)
Enzymes [BR:cobc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     F8A90_13035 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     F8A90_13035 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Rotamase_3
Other DBs
NCBI-ProteinID: QQK64942
LinkDB
Position
complement(3120233..3121489)
AA seq 418 aa
MSLSPRASRAHRDSHSRDSHSCDRSAPSARDARHMAHALRLARLGSYTTQPNPRVGCVLV
EAETDEVIASGFHVRAGEGHAEVNALAEAGERALGCVAYVTLEPCSHTGRTGPCSLALIA
AGVSRVVIAMRDPNPQVAGRGIALLQGAGIAVTVGVMEQEARALNPGFLSRMERGRPFVR
LKQAMSLDGRTAMASGESQWITGPEARSAVQRLRARSSVVMSGIESVIFDDSRLNVRADQ
LGLEDHPLGLEALVARQPLRVVVDSHLRLPLAARILAQSGRTLLVCVADETAAQAERRRL
LEAAGAEVLALPAGPEGRVDLEALLRHLAEHEQANEVLLETGAVLAGAMIQAGLVDEMQI
FMAPALLGGEARPLLALPGLDRMAQQRRVEIRDIRAVGRDWRITAVPLASPDPQESGD
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtctctttctccccgtgcttctcgtgctcaccgtgacagccattctcgcgatagccac
tcttgcgaccgcagtgccccctcggcgcgtgatgcgcgccacatggcccacgccctgcgc
ctggcgcgcctgggcagctacacgacgcagcccaatccgcgtgtcggctgtgtcctggta
gaggccgagaccgacgaggtgatcgcgagcggctttcacgtgcgtgccggggaagggcat
gccgaggtcaatgcgctggcagaggcgggcgagcgcgcgctgggctgcgtggcttatgtg
acactggagccctgctcccacaccgggcgcaccggcccttgctcgctggccttgatcgcg
gcgggggtgtcgcgggtggtgatcgcgatgcgtgatccgaatccgcaggttgccgggcgc
ggcatcgcgctgctgcagggcgcgggcatcgcggtgacggtcggggtgatggagcaggag
gcgcgagcgctcaatcccggctttctgtcacgcatggagcgcggtcggcctttcgtgcgc
ctcaagcaggccatgagtctggacgggcgcacggcgatggcttccggcgaatcccagtgg
atcaccggccccgaagcgcgcagtgccgtgcagcgcctgcgtgcgcgctccagtgtggtg
atgagcggcatcgagtcggtcatcttcgatgattcgcgtctcaacgtgcgcgccgaccag
ctcgggctcgaagaccatccgctggggctcgaggcgctggtggcgcgtcagccgttgcgc
gtggtggtggatagccatctgcgtctgccgctggcggcgcgcattctggcgcaatccggt
cgtacgcttctggtgtgtgtcgcggatgagacagcggctcaggcagaacggcgcagactg
ttggaagcggccggcgccgaggtgctggcgctgccggcgggcccggagggacgcgtggac
ctcgaggccctgctgcgccatctggccgagcacgagcaggccaacgaggtgctgctggag
accggtgcggtcctggccggcgccatgatccaggcggggctggtcgatgagatgcagatc
ttcatggcaccggcgctgctgggtggcgaggctcgcccgctgctggcgctgccggggctg
gatcgcatggcacagcagcgccgggtcgagattcgagacatccgggcggtggggcgtgat
tggcgcatcaccgcagtgccattggcatcgccagacccgcaggagagcggcgactga

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