Cobetia sp. cqz5-12: F8A90_13090
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Entry
F8A90_13090 CDS
T10568
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc00260
Glycine, serine and threonine metabolism
cobc00460
Cyanoamino acid metabolism
cobc00630
Glyoxylate and dicarboxylate metabolism
cobc00670
One carbon pool by folate
cobc00680
Methane metabolism
cobc01100
Metabolic pathways
cobc01110
Biosynthesis of secondary metabolites
cobc01120
Microbial metabolism in diverse environments
cobc01200
Carbon metabolism
cobc01230
Biosynthesis of amino acids
cobc01240
Biosynthesis of cofactors
cobc04981
Folate transport and metabolism
Module
cobc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F8A90_13090
09102 Energy metabolism
00680 Methane metabolism
F8A90_13090
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F8A90_13090
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
F8A90_13090
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
F8A90_13090
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
F8A90_13090
Enzymes [BR:
cobc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
F8A90_13090
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DUF3863
Motif
Other DBs
NCBI-ProteinID:
QQK64953
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Position
complement(3132532..3133794)
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AA seq
420 aa
AA seq
DB search
MFTRDMQIAGFDDALLSAMDDEVVRQEAHIELIASENYASPRVIQAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVEQLAIDRACELFGATYANVQPHAGSQANSAVFQALVSPGDTILGMS
LDAGGHLTHGARPNFSGKHYNAVQYGLGENGLIDYAEVARLAREHKPKMIIAGFSAYSQI
IDWAEFRKIADEVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGLIL
SAEGNADIEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEAMDPAFTTYQKQVVKNAKAMAS
VFLERGFEVVSGGTEDHLFLLSLVKQGLTGKDADAALGRAHITVNKNAVPGDPQSPFVTS
GLRIGTPAVTTRGFQEQECLELAGWICDILDAMVAGDSAAAEAEVQAKVSAVCARLPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccgtgacatgcagattgccggttttgatgatgcgctcctgagcgcgatggac
gacgaagtcgttcgccaggaagctcacatcgagctgatcgcctccgagaactacgccagc
ccccgcgtcatccaggcgcaaggctcccagctgaccaacaagtacgcggaaggttacccg
ggcaagcgttactacggcggttgcgagttcgtcgacaaggtcgagcagctggccatcgat
cgtgcctgcgaactgttcggtgccacctacgccaacgttcagccgcacgccggttcccag
gccaacagtgccgtcttccaggcgctggtctcgccgggcgacaccatcctgggcatgagt
ctggacgcggggggtcacctgactcacggtgcacgtccgaacttctccggcaagcactac
aatgccgtgcagtacggtctgggcgagaacggcctgatcgactacgccgaagtcgcgcgt
ctggcgcgtgagcacaagccgaagatgatcatcgccggcttctccgcctactcccagatc
atcgactgggccgagttccgcaagatcgccgacgaagtgggtgcctacctgctggtcgac
atggcccacgtggctggcctggtcgccgctggggtctacccgagcccgctgccccacgca
cacgtcgtcaccaccaccacgcacaagaccctgcgcggtccgcgtggcggcctgatcctg
tccgccgaaggcaatgccgacatcgagaagaagctgaactccgctgtcttcccgggcggc
cagggtggcccgctgatgcacgtcatcgcggccaaggcagtgtgcttcaaggaagcgatg
gacccggccttcaccacttaccagaagcaagtggtcaagaacgccaaggcgatggcgtcc
gtgttcctggagcgcggcttcgaagtcgtctccggcggcaccgaagaccacctgttcctg
ctgtctctggtcaagcagggcctgaccggcaaggacgctgacgctgcgctgggccgtgcc
cacatcaccgtcaacaagaatgccgtaccgggtgacccgcagtcgccgttcgtcacctcc
ggtctgcgcatcggtactccggccgtcaccacgcgtggtttccaggagcaggagtgtctg
gaactggccggctggatctgcgacatcctcgacgcgatggtcgctggcgattccgccgct
gccgaagccgaggtgcaggccaaggtctctgctgtctgtgcacgtctgccggtctacgcc
tga
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