Cobetia sp. cqz5-12: F8A90_13185
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Entry
F8A90_13185 CDS
T10568
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobc03021
]
F8A90_13185 (rpoS)
Transcription machinery [BR:
cobc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F8A90_13185 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QQK64970
LinkDB
All DBs
Position
complement(3153784..3154758)
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AA seq
324 aa
AA seq
DB search
MSMLEKDIDQAEVELSLEDVEDDDTLEAEAEEAAFERALNREERKHYQSLDATQIYLNEI
GFSPLLKPEEEVYFGRLAQAGDPAGRQRMIESNLRLVVKIARRYLNRGLSLLDLIEEGNL
GLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARQL
TQKLDHEATAEEIADFLDKPVDTVKKMLGLNERVSSVDYPMGGESDKPLIETIADENDTS
PESSLVDVDVKAHVDEWLAELTEKQMEVVVRRFGLRGHEAATLEEVGEEIGLTRERVRQI
QVEALKKLRRMLEKQGLTLESIFE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgctggaaaaggatatcgatcaggctgaggttgagttgtcccttgaggatgtc
gaggacgacgatacgcttgaggcagaagcggaagaggcggcattcgaacgcgccttgaac
cgtgaagagcgcaagcactaccaaagcctagatgcgacccagatctacctgaacgagatc
ggtttttccccgttgctcaagcccgaagaggaagtctacttcgggcgtctggcacaggcg
ggtgaccctgccggtcgccagcgcatgatcgagtccaacctgcgtctggtggtcaagatc
gcacggcgttatctgaatcgtggtctgtcgctgctcgatctgatcgaggaaggcaatctg
gggttgatccgtgcggtggagaagttcgaccccgagcgcggtttccgcttctcgacctac
gccacctggtggattcgccagaccatcgagcgggcactgatgaatcagacgcgcaccatt
cgtctgccgatccacgtcgtcaaggaactcaacatctacctgcgtgccgcgcgtcagctg
acccagaaactggatcatgaggccaccgcggaggagatcgccgatttcctggacaagccg
gttgataccgtcaagaagatgctggggctcaatgaacgcgtgtcatccgtcgactatccg
atgggcggcgagagcgacaagccgctgatcgagacgatcgccgacgagaatgacaccagc
ccggagtccagcctggtggatgtcgacgtcaaggcgcatgtcgatgagtggttggcggag
ttgaccgagaagcagatggaagtggtggtacgccgcttcgggctgcgcggtcatgaagct
gcgacgctggaagaagtgggcgaggaaatcggtctgacgcgagagcgggtgcgtcagatt
caggtcgaggcgctcaagaagctgcgacgcatgctcgagaagcaggggctgacgctcgaa
tccatctttgaatga
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