Cobetia sp. cqz5-12: F8A90_13805
Help
Entry
F8A90_13805 CDS
T10568
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc00540
Lipopolysaccharide biosynthesis
cobc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
F8A90_13805
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cobc01005
]
F8A90_13805
Lipopolysaccharide biosynthesis proteins [BR:
cobc01005
]
Lipid A
F8A90_13805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
QQK66023
LinkDB
All DBs
Position
3301349..3302326
Genome browser
AA seq
325 aa
AA seq
DB search
MALIMLGAVALAPMVEAAEDEGGVLSLKVENDLLASGDDGHYTNGFALSYTFATPDQHWS
RSFADWVPGFSAARLDATAYRFGQQIYTPNDISREQPDQDDRPYAGYLFGGVSLFAGEEG
DDWRRVDTFNLDLGIVGPASGAKEAQKGVHEITGSDEPEGWDHQLNNEPVISTGWQTQLW
LPARAAGLEVEYGPSASVALGNLYTYAGVGGGIRIGQGLTRSYGIPTVAPAQGGRQYFHP
DGDFAWYLFANIEGRAMAYNMLLDGNGFEDSASVDRRPLVGDLQLGFALSWQRWQLAFVN
VWRTHEFETQQESDQFGSLTLSTWL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatcatgctcggtgcagtggcattggcccccatggtggaggcagccgaggac
gagggtggcgtgctgtcattgaaggtcgagaatgaccttctcgcctccggcgatgacggc
cactacaccaatggctttgcgctgagctataccttcgcgacaccggatcagcattggtca
cgctcattcgcggactgggtacccggcttcagcgcggcgcgactggacgccacggcctat
cgcttcggacagcagatctatacccccaatgacatctctcgcgaacaaccggatcaggac
gaccgcccctacgcgggctacctgttcggtggcgtatcgctgttcgctggtgaagaggga
gatgactggcgacgggtggacaccttcaatctggatctcggcatcgtcggcccggcctcg
ggcgccaaggaggctcagaagggagtccacgagatcaccggcagtgatgaaccggaaggc
tgggatcaccagctgaacaacgagccggtgatcagcaccggctggcagacgcagctatgg
ctgccggcccgggccgcggggcttgaggtggagtacggcccctcggcttccgtggcgctg
ggcaacctctacacctatgcgggcgtcggtggcggcatacgtatcggccaggggctgacc
cgcagctacgggataccgacagtggcaccggcccagggcggccgtcagtactttcatccc
gacggcgactttgcctggtatctgttcgccaatatcgaaggccgcgcgatggcctacaac
atgctgctggacggcaatggcttcgaggacagcgcctcggtggaccgtcgtccgctggtc
ggcgacctgcaactgggcttcgcgctcagctggcaacgctggcagctggcgttcgtcaac
gtgtggcgcacccacgaattcgagacgcagcaggagagcgatcaattcggctcgctgacg
ctctcgacctggctatga
DBGET
integrated database retrieval system
