Cobetia sp. cqz5-12: F8A90_14210
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Entry
F8A90_14210 CDS
T10568
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobc03000
]
F8A90_14210
Transcription factors [BR:
cobc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
F8A90_14210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
MarR_2
HTH_23
HTH_10
HTH_IclR
HNH_repeat
HTH_3
Sigma70_r4_2
Sigma70_r4
TetR_N
Sigma54_DBD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QQK65139
LinkDB
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Position
3405132..3406169
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AA seq
345 aa
AA seq
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MPSQPHKASRLKRVTLADIAARLGVTKVTVSRALNQPEKVSAAMRERVTECARELGYMPN
RQAGSLASGHSRLIALLIPSLSNAVFSELHRGLEAPLAAAGYQLLIGHTGYSMQEEERLI
ETWLSFGIDGLVLCGSRHSPRTREMIARSGCAVVECMEKRETPLDMAVGLDQHAAGRAMT
EAMIALGHRHIGFLGARMDRRVEQRLGGWRAAMEAAGLSQQALLTTDAPSSVRMGGELLD
EMLTRWPETQAVFCCNDDLAAGGLFECQRRGLSVPDQLALAGFNGLEMTRGTWPPLASVV
TPRREIGERAAALLLARLSGDLDATPHGLWEDLGFSLQKGGSLAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcagccacacaaagcttcccgcctcaagcgcgtcaccctggccgatatcgcc
gcccgactgggcgtcaccaaggtcacggtgtcgcgcgcgctcaatcagcccgagaaggta
tccgccgcgatgcgcgagcgggtaaccgaatgtgcccgcgagctgggttacatgcccaat
cgtcaggccggcagcctcgccagtggtcactcgcgactgatcgcgctgctgattccttcg
ctctccaacgccgtgttctcggagctgcatcgcggcctggaagccccactggccgccgcg
ggctatcagctgctgatcggccataccggctattcgatgcaggaagaggagcgcctgatc
gagacctggctctccttcggcatcgacgggctggtgctgtgcggcagtcgccatagccct
cgtacccgcgagatgatcgcgcgctcgggctgtgcggtggtggaatgcatggagaaacgc
gagacgccgctcgacatggcggtaggactggaccagcacgccgctggccgcgcgatgacc
gaggccatgatcgccctggggcatcgccatatcggctttctcggcgcgcgcatggaccgc
cgcgtcgaacagcgcctgggcggctggcgtgcagcaatggaggccgccggcctgtcgcag
caggcgctgttgaccaccgatgcgccctccagcgtgcgcatgggcggcgagctgctcgat
gagatgctgactcgctggcccgagacccaggccgtgttctgctgcaatgacgacctggcg
gccggcgggctgttcgagtgtcaacgccgcggcctgtcggtgcccgaccagctggcactg
gccggcttcaacggcctggagatgacccgcggcacctggccgccgctggccagcgtggtc
acgccacgccgcgagatcggcgagcgcgccgccgctctgctgttggcgcgcttgagcggt
gatctcgacgccacgccccacggcctgtgggaagatctgggcttcagtctgcagaaaggt
ggcagcctggcgccatga
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