Cobetia sp. cqz5-12: F8A90_14230
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Entry
F8A90_14230 CDS
T10568
Name
(GenBank) efflux RND transporter permease subunit
Organism
cobc Cobetia sp. cqz5-12
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Flavi_glycop_C
PrkC-like_PASTA-like
Motif
Other DBs
NCBI-ProteinID:
QQK66030
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Position
3410267..3413353
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AA seq
1028 aa
AA seq
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MHDHGVAANLLMLCLILGGLLMSSQIKKEVFPSFELEIINVSVSYSGATPDEVSESLLQA
MESAVQDVEGIEEITATAEEGLGSLSIELQDGVETMRAYQDIQQAIDSITTLPDESDPPV
YSLAGRSRSVMELKLHGQTDDQTLRNVAERLRLSLLDSDDITKVELTGIRDREVHVALEE
GALRRYGLSHQDIAGLIGNQALNLAGGSLDTQQGEYLVRYEARRDGAAEFAQLPVISSQE
GNVVRLGDIATVTDGFADSDKEVLYDGEPAIGLDIYQVGSQTPNELSAATMAMLPQLTAS
LPRGLTLSVEDDDSLVYQDRLELLLKNAWMGLVLVLVLLGLFLEARLAFWVTLGIPTAFL
GAMLFLPLVGVSINMISMFAFIIALGIVVDDAIIVGENIHSHRERGASMREAAILGAREI
AVPLAFSILSNIVAFIPLLFLPGFLGLVFGIIPLVVISIFALSWIEAIFILPAHLGHTSE
KPIRWLAPLDRVRHGVQHGLERFTRRRFQPFLEGCLNYRGLTAICGLALLVLAMAWMASG
RLGFSLMPRVESNRAGVTANLPVGSPISQDREVRTLLLDALERVRERDDAPAIFSTSAEI
EGNSLSIIANLDTTVEDNWSPSQLITAWREEAGTIANTDSLLFESDIGGPGRGAGLTIRL
SSSDSGALMAAAESLATSLEDYSSLSDVDSGLDDGKRELYLQLNAYGRSLGLDGATLANQ
LRGPLSGATALKQQQGRNEVEVKVLLPEDQRASLAQLENFGVQTGNGVSVPLGLVADIEQ
GRAASSILRIDGRRVIEVTANVTPSDAVSQVITSLESDVYPQLKSQYPSLSIGYGGRQEE
TADNLGSLQVSLLLTLAALYLLLALPFRSYLQPLLVMTAIPFGLIGAVIGHQLMGYGLSV
ISLMGMLALSGIVINDALVLIDYANRQRLAGATAREAIIMAATRRLRPILLTTLTTFFGL
APMIFETSRQARFMIPMAVSIGFGILFATVILLILVPSLYLLLEDLQHNLRRLLGLPPRT
PRQEEQPS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatcacggcgtcgccgccaacctgctgatgctgtgtctgattctcggcggcctg
ctgatgtccagtcagatcaagaaggaggtcttcccctccttcgaactcgagatcatcaac
gtcagcgtcagctattccggcgccacgccggatgaggtctccgagagcctgttgcaggcg
atggagtccgcggtacaggacgtggagggcatcgaggagatcaccgccaccgccgaggaa
ggcctcggctcgctgtccatcgagctgcaggacggcgtcgagaccatgcgcgcctatcag
gacatccagcaggccatcgacagcatcaccaccctgcccgatgaatccgatccgcccgtc
tactcgctggcgggccgctcgcgcagcgtgatggagctcaagctgcatggccagaccgat
gaccagaccctgcgcaatgtcgccgagcgtctgcgcctgagcctgctcgacagtgacgac
atcaccaaggtggagctgaccggcatccgtgaccgcgaggtgcatgtcgcgctggaagaa
ggcgcgctgcgccgctatggcctgtcgcatcaggatatcgccggcctgatcggcaatcag
gcgctcaacctggccgggggtagcctcgacacccagcagggcgaatacctggtgcgctat
gaggcgcgtcgcgacggcgccgccgagttcgcgcagctgccggtgatctccagccaggaa
ggcaatgtcgtgcgtctgggcgatatcgccaccgtcaccgatggcttcgccgacagcgac
aaggaagtgctctacgacggcgaaccggcgattggcctggacatctatcaggtcggctcc
cagacacccaacgaactgtccgcggcgaccatggcgatgctgccgcaattgaccgccagc
ctgccgcgtggtctgacgctgagcgtcgaggacgatgactcgctggtctatcaggaccgt
ctggagctgctgctcaagaatgcctggatggggctggtactggtactggtgctgctgggg
ctgttcctcgaggcgcgtctcgccttctgggtcacgctgggcattcccaccgccttcctc
ggcgcgatgctgttcctgccgctggtcggcgtgtccatcaacatgatctcgatgttcgcc
ttcatcatcgcgctgggcatcgtggtcgatgacgccatcatcgtcggcgagaacatccac
tcgcaccgcgagcgcggcgccagcatgcgcgaagccgccattctcggcgcgcgcgagatc
gcggtgccgctggcgttctcgatcctgtccaacatcgtcgccttcattccgctgctgttc
ctgcccggcttcctcgggctggtgttcggcatcatcccgctggtggtgatcagcatcttc
gcgctgagctggatcgaggcgatcttcatcctgcccgcacacctgggtcacaccagcgag
aagccgatccgctggctggcaccgctggaccgcgtgcgccatggcgttcagcacggcctc
gagcgcttcacgcgacgccgcttccagcccttcctcgaggggtgcctgaactatcgcggc
ctgaccgccatctgcggcctggcgctgctggtactggcgatggcctggatggccagtggc
cgcctcggtttctcgctgatgccgcgtgtcgagtccaaccgtgccggcgtcaccgccaac
ctgccggtgggtagcccgatcagccaggaccgcgaggtacgcaccctgctgctggacgcg
ctggagcgagtccgcgagcgcgacgacgcccccgctatcttctccaccagcgccgagatc
gaaggcaactcgctgagcatcatcgccaacctggacaccacggtggaggacaactggtcg
ccctcgcagctgatcacggcctggcgtgaggaagccggcaccatcgccaataccgattcg
ctgctgttcgagtccgacatcggcggcccgggtcgtggcgccggcctcaccatccggctt
tcctcgtctgacagtggcgcgctgatggccgccgccgagtcgctggcgacgtcacttgag
gattacagctcgctgtcggacgtcgacagcggcctggatgacggcaagcgcgagctctat
ctgcagctcaatgcctacggtcgctcgctgggcctggatggcgccaccctggccaaccag
ctgcgcgggccgctgtccggcgcgactgccctcaagcagcagcagggccgcaatgaggtc
gaggtcaaggtgctgctgcccgaagaccagcgcgcaagcctcgcccagctggagaacttc
ggcgtacagaccggcaacggcgtcagcgtccccctggggctggtggccgacatcgagcag
ggacgcgccgcgtccagcatcctgcgcatcgacgggcgccgcgtgatcgaggtcaccgcc
aacgtgactccgtccgacgcggtcagtcaggtgatcaccagtctggaaagcgacgtctac
ccccagctgaagagccagtatccgagcctgagcatcggctatggcgggcgtcaggaggag
accgccgacaacctggggtcattgcaggtgtcgttgctgctgacgctggcggcactctat
ctgctactggcgttgccgttcagaagctatctgcagccgctgctggtgatgacggcgatt
ccctttggcctgatcggcgcagtcatcggccatcagctgatgggctatggcctgtcggtg
atcagcctgatgggcatgctggcgctgtcgggcatcgtcatcaacgacgccctggtgctg
atcgactacgccaaccgccagcgtctggccggcgccaccgcgcgtgaggcgatcatcatg
gcggccacgcggcgtctgcgccccatcctgctgacgacactgaccaccttcttcggcctg
gcgccgatgatcttcgagacctcgcgccaggcgcgcttcatgatcccgatggcggtctcc
atcggcttcggcatcctgttcgcgacggtcatcctgctgatcctggtgccctcgctctat
ctgttgctggaagacctgcagcacaacctgcgacgcctgctggggctgccgccccgcacc
ccgcgtcaggaggaacaaccatcatga
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