Cobetia sp. cqz5-12: F8A90_14500
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Entry
F8A90_14500 CDS
T10568
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F8A90_14500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobc02000
]
F8A90_14500
02044 Secretion system [BR:
cobc02044
]
F8A90_14500
Transporters [BR:
cobc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
F8A90_14500
Secretion system [BR:
cobc02044
]
Type I secretion system
Adhesin protein transporter
F8A90_14500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
MMR_HSR1
AAA_29
Zeta_toxin
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
QQK66038
LinkDB
All DBs
Position
complement(3483832..3485925)
Genome browser
AA seq
697 aa
AA seq
DB search
MARYHGNPRSAAVLVDGLPMEEGRLPLALVSRAAARANLSAKLVNQQITAISDMLMPCIL
ILKEERAVVLLEVDNDAGKARIHQPEADGDELVDIESLAERHDGRVVYLKQEHRFDERAP
ETLKQSDGHWFWSTLKLSRPIYRDVILASILINLFAVASPLFVMNAYDKVVPNLAFNTLW
VLATGMAIIMVFDFVMRQTRAYFMDTAGKKSEVLLTSKLFSKTMNLRMEARPGSVGGYVK
HLQEFDSIREFFTSATLTTLVDLPFALLFLLVIWIVAGPLVLVPFAALVILLVYSLAIQK
PLRSSIEQGSRLATERNARLVEAVSGLESLKLANAQGETQRRYERAVGQIAHWGVKSRNL
TTSVSSLSMSLTQATTVALVVFGVYLIADARLSVGGLIAAVMLSGRALQPLGQLALLITR
IGQTRSAMSALEQIMALPEESEDRRYVHREHLQMRIEFDRVGFAYAPNTPPAVSDISLTI
NPGERIAIIGRIGAGKSTLQRLVSGLYRATAGSVRIDGLDLNQLHPADVRRHIGHAGQDS
SLFFGSIRDNITLGQPHASDVQIDLAADASGVTEFTRHHPEGLDRQVGEGGRMLSSGQRQ
TVLLARALLMRPPLLLLDEPGSHMDNRAELRLRRMLKSLPRSQTLVLVTHKSSMLDVVDR
VIVMEGGRIVADGPKQQVLSALNEGRVAGRKQEVNRG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttaccacggcaatcccagatctgcagcagtgctggtcgatggtcttcccatg
gaggaaggccgacttcccctggcgcttgtcagtcgtgccgcggcacgtgccaatctgagt
gccaaactggtcaaccagcagatcacggccatcagcgacatgttgatgccgtgcattctc
atactcaaggaagagcgtgctgtcgtcttgctggaggtcgacaacgacgcaggcaaggcc
aggattcatcagcctgaggccgatggcgatgaactggtggacatcgaatcactggctgag
cgtcatgatgggcgtgtcgtctatctcaagcaggagcaccgctttgatgaacgcgccccg
gaaacgctcaagcagagcgatggtcattggttctggtcgacgctgaagctgtcgcggccg
atctaccgtgacgtgatcctggcgtcgatattgatcaacctgttcgccgtggcatcacca
ctgttcgtgatgaatgcctatgacaaggtcgtgcctaacctggccttcaacacgctgtgg
gtcctggcgacgggtatggcgatcatcatggtgtttgacttcgtgatgcgccagacacgc
gcctacttcatggacacggcgggcaagaagtccgaggtactgctgacctcgaagctcttc
tccaagaccatgaacctgcggatggaagcgcgtcccggctccgtcggtggctatgtgaag
cacctgcaggagttcgattcgatccgcgagttctttacctccgcgaccttgaccactctg
gtcgatctgccgtttgccctgctgttcctgctggtgatctggatcgtggctggaccattg
gttctggtgccattcgccgcgctcgtgatcctgcttgtctacagtctggcgatccagaaa
ccgctgcgcagcagtatcgagcagggttcgcgcctggcgacggagcgcaatgcgcgcctc
gtcgaagcagtctcaggtctcgagagtctcaagctggccaatgctcagggtgaaacccag
cgccggtatgaacgcgccgtcgggcagatcgcgcattggggggtgaaaagccgcaatctg
acgacctctgtcagctcgctgagcatgtcgctgacacaggctaccacggtggcactggtc
gtgttcggggtctatctgatcgcggatgcacgcctgtctgtcggtggcttgatcgccgcg
gtcatgctgtccgggcgtgcattgcagccgctggggcagttggcgttgctgatcacgcgc
atcggccagactcgcagtgcgatgagtgcgcttgagcagatcatggcattgccggaagag
tcggaagatcgtcgttacgttcaccgcgagcacctgcagatgcgtatcgaattcgatcgc
gtcggctttgcctatgcgccgaatacgccgcctgccgtatcggatatctcactgaccatc
aatccaggtgagaggatcgcgatcatcgggcgtatcggtgctggcaagagtaccttgcag
cgtcttgtctctggcctgtatcgcgccacggcgggcagcgttcgcattgatgggctggat
ctcaatcaactgcaccccgccgacgtacgtcggcatatcggccatgcgggccaggacagt
tcactgttcttcggctccattcgcgacaacatcactcttggccaaccacacgccagtgat
gtacagatcgatctcgcagctgatgcctccggcgtgaccgaattcactcgtcatcatccc
gaaggtctggaccgtcaggtcggtgaaggcggacgcatgctctccagcggtcagcgtcag
acagtcttgctggcacgcgcactcttgatgcgtcccccgctcttgctgctcgatgagcct
ggttcgcacatggataatcgcgccgagctgcggctgcgcagaatgctcaagtccctgccg
cgcagtcagacgctggtgctggtcacccacaagagcagcatgctcgacgtggtagaccgc
gtcatcgtcatggaaggagggcgcatcgtcgccgatgggcccaagcagcaggtgctgagc
gccttgaatgaaggccgagtcgccgggcgcaagcaggaggtgaatcgtggctaa
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