Cobetia sp. cqz5-12: F8A90_14620
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Entry
F8A90_14620 CDS
T10568
Symbol
rlmN
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobc03009
]
F8A90_14620 (rlmN)
Enzymes [BR:
cobc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
F8A90_14620 (rlmN)
Ribosome biogenesis [BR:
cobc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F8A90_14620 (rlmN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
QQK65206
LinkDB
All DBs
Position
3527436..3528593
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AA seq
385 aa
AA seq
DB search
MTDTTATATDAAAPAAVKLTNLLGLPRPAMEAFFESIGEKKFRATQVMKWIHQEGVDSFD
EMTNLAKPLRERLKQVAEIRAPGIVYEGESKDGTRKWVLEVSDGSYVETVLIPSENGNRR
TLCVSSQVGCSLDCSFCSTGKQGFERDLTAAEIIGQVWVATRGAEDRKDTRKRPVTNVVM
MGMGEPLMNYDNVVPAMKLMLDDNAYGLSKRRVTLSTSGVVPKLDQLGDEMDVSLAISLH
AANDELRNVLVPINRKWNIRALLDSCHRYLAKCDDARIVTIEYTLIKDVNDQIQHAEELA
ALLDELPCKINLIPFNPFPHSGYEKPSRNQVMRFQQRLYELGYTAPVRATRGDDIDAACG
QLVGQVKDRTRRAERYINAIQLDAD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccactgcaactgccaccgatgccgcggcgcctgccgccgtcaagctcacc
aacctgctgggcctgccgcgcccggcgatggaagccttcttcgagagcatcggcgagaag
aaattccgcgccacccaagtgatgaaatggattcaccaggaaggtgtcgacagcttcgac
gagatgaccaacctcgccaagccgctgcgcgagcgcctcaagcaggtcgccgagatccgt
gcgccgggcatcgtctatgaaggcgagtccaaggacggcacccgcaagtgggtactggaa
gtcagcgatggcagctacgtcgagaccgtgctgatcccgtccgagaacggcaaccgtcgc
accctgtgcgtgtcttcccaggtcggttgctcactggactgcagcttctgctccaccggc
aagcagggcttcgagcgtgacctgaccgccgccgagatcatcggccaggtgtgggtcgcc
acccgcggcgccgaagaccgcaaggacacccgcaagcgtccggtcaccaacgtggtgatg
atgggcatgggcgagccgctgatgaactacgacaacgtcgtgccggcgatgaagctgatg
ctggacgacaacgcctatggcctgtccaagcgtcgcgtcaccctctccacctccggtgtg
gtgcccaagctggaccagctcggtgacgagatggacgtcagcctggcgatctcgctgcac
gcggccaacgatgaactgcgcaacgtgctggtgccgatcaaccgcaagtggaacatccgc
gcgctgctcgactcctgccatcgctacctggccaagtgtgacgacgcacgtatcgtcacc
atcgagtacaccctgatcaaggacgtcaacgaccagatccagcacgccgaggaactggcc
gcgctgctcgacgaactgccgtgcaagatcaacctgatcccgttcaacccgttcccgcat
tccggttacgagaagccgtcgcgcaatcaggtgatgcgcttccagcaacgtctctacgag
ctgggctacaccgcaccggtgcgcgccacacgtggcgatgacatcgacgccgcctgtggc
cagctggtcgggcaggtcaaggaccgcacccgtcgcgccgagcgttacatcaacgccatc
cagctcgacgccgactga
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