Cobetia sp. cqz5-12: F8A90_14730
Help
Entry
F8A90_14730 CDS
T10568
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobc03009
]
F8A90_14730 (rsmB)
Enzymes [BR:
cobc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
F8A90_14730 (rsmB)
Ribosome biogenesis [BR:
cobc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
F8A90_14730 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltr_RsmF_N
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QQK65225
LinkDB
All DBs
Position
3553406..3554857
Genome browser
AA seq
483 aa
AA seq
DB search
MSQSDNPSSKGNGKKRNSLPPARSKGGAHKHGGARRKPDNAPASPGAAVRVAAARTLAPV
LAARTSLNLDSLPSGVAGRDQGLYKALCFGVCRQLPRLDALAGKLLKSSFKSQDQDIHAL
LLLGLYQLLYMRIAPHAAVGETAGAARGLGKGWATGVLNACLRRFQREQEALEAEVDKDP
AVALSHPQWLLDTFQRNWPDDWQAIAEANNAQAPMTLRVNVSAISRDDYLAQLAEAEIEG
VACPFAEHGITLTSACDVSALPGFEEGLVSVQDEAAQLAGQLLAPAVTAINAEGEGVRLL
DACTAPGGKLADMLERFPGLDATAIDIDGERLERVEETLERLELGAGVVCADASERDWWD
GEAFDVILLDAPCSGSGVIRRHPDIKLLRRPNDIGDLARLQGKLLANLWGMLKPGGTLVY
GTCSIITQENARVMDRFLAATPDAKAETIKADWGRVSGAGRQMLPQVNGHDGFYLAHITK
ASA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcagacaacccgtcctccaagggcaacggcaagaagcgcaactccctgccg
ccggcccgcagcaagggcggcgctcacaagcatggcggcgcccgtcgcaagcctgacaat
gcaccggcctcgccgggcgctgcggtgcgtgtcgcggctgcgcgcacgctggccccggtg
ctggccgcgcgtacctcgctgaacctggacagcctgccgtccggcgtcgccgggcgtgac
cagggcctctacaaggcactgtgcttcggcgtctgccgtcagttgccgcgtctggatgcc
ttggcgggcaagctgctgaagtcgtccttcaagtcgcaggatcaggacatccacgccctg
ctgctgctcggcctctatcagctgctgtacatgcgcatcgccccgcacgccgccgtcggt
gagaccgctggcgccgcccgtggcctcggcaagggctgggccaccggcgtgctcaacgcc
tgtctgcgtcgtttccagcgtgagcaggaagcgctggaagccgaggtcgacaaggacccc
gccgtcgctctgtcccatccccagtggctgctggataccttccagcgcaactggccggac
gactggcaggccatcgccgaggccaacaatgcccaggcgccgatgaccttgcgcgtcaat
gtctccgccatcagccgcgacgactacctcgcccagctggcggaagccgagatcgaaggc
gtagcctgccccttcgccgagcacggcatcaccctgaccagcgcctgcgacgtcagcgcc
ctgccgggcttcgaggaaggcctggtcagtgtgcaggatgaagcggcacagctggccggt
cagctgctggcaccggccgtgacggccatcaacgccgagggtgaaggcgtgcgcctgctg
gatgcctgcaccgcgccgggcggcaagctggcggacatgctggagcgcttcccgggcctg
gacgccaccgccatcgacatcgacggcgagcgcctcgagcgcgtggaagagacgctggag
cgtctggagctgggtgccggcgtcgtgtgtgccgatgccagcgaacgcgactggtgggac
ggcgaagccttcgacgtcatcctgctcgacgcgccctgctccggcagtggcgtcatccgt
cgtcacccggacatcaagctgctgcgtcgcccgaatgacatcggcgatctggcacgcctg
cagggcaagctactggccaatctgtggggcatgctcaagcccggcggcaccctggtctac
ggcacctgctccatcatcacccaggaaaacgcccgcgtgatggaccgcttcctggccgcg
acgccggacgccaaggccgagaccatcaaggccgactggggccgtgtctccggtgctggc
cgccagatgctgccacaggtcaatggtcacgacggcttctacctagcccacatcaccaag
gccagcgcctga
DBGET
integrated database retrieval system
