Cobetia sp. cqz5-12: F8A90_16375
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Entry
F8A90_16375 CDS
T10568
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cobc02044
]
F8A90_16375
02035 Bacterial motility proteins [BR:
cobc02035
]
F8A90_16375
Secretion system [BR:
cobc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
F8A90_16375
Bacterial motility proteins [BR:
cobc02035
]
Pilus system
Pilus assembly proteins
F8A90_16375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
PQQ_3
VWA_2
Importin_rep_6
SH3-A_UBE2O
Motif
Other DBs
NCBI-ProteinID:
QQK65501
LinkDB
All DBs
Position
complement(3954873..3958496)
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AA seq
1207 aa
AA seq
DB search
MRYLLSGALCLVALPCLAAPGEIARAPVTEATGVQPNILFILDDSGSMAWEDTLNKGVEH
WSLQPASSLMGYTGVYSKSLVTVRNNHDADDRIVSYTDLGGAIGACMGFNVMAYNPALTY
TPWAGADRAGIAYQNMSLSNVREDPYEPTSWARMSDDAYYVRWDDNGDGDYDYGECGLYR
DGAGRLYLDEDHVVEVEDLSAAQQVNFANWFTYYRDRMLVAKSAMAGVINANESRVGLRT
IQGRNNRNVADMTDTDEREALLEELFTAYPSGGTPLRTALKNAGEYYSSTGRSAPILSAD
EGGMCQQNYSIMMTDGYWNGSSPSVGNVDGGSGDFISASHRDSYSDTLGDVAMKYYREDL
RTDLIDSVPTIPGVDENSAQHMVTYTVGFGVDGSLSENPADLESAFTWPQPVANANTTID
DLRHAAWNGRGEYLSAANPQALIDALNNIAQSIAGRAASTGSLDISSGGQTSGAYVIQTI
YDPADWSGDVVARKIGTNGTLSATSDWSVAEWLRDDDSRSSSRKVITYNPGIAEVDEKAF
FFDIEEAGSLEAEQVLDLVGFLDETLLSETLLATLRRTVRDDDDDDDDDDDDDDDDDDDG
ILGGVGSVVGGVTNGVAQLTGRVLDTTGTFLKLDGTNLGVRTSDLENLIGYLKGDDAYEG
TLFRERDDNYLGDIVHASPAIVGPPSASYRNDMEVSSYRSFKTLYEDRQNMIYIGANDGM
LHAIDMETGEEKFAYMPYAAFSIENGRGIRQLADQNYVHQYYVDATPVARDVHVQLGDED
APGWHSVLLGGLGAGGKAVYMLDITDPEGFESLGESNGTSPADIVQWEFTHEDLGYTFSD
IQVARLDDGKWYAIFGNGYNADSDGRAKLFIVDLEDPDNYALLDSQQGSNAGGSCTSASS
DCNGMSSPELADIDADGITDWVYAGDLHGNVWVFDMRDFSLSNIGSSEMSRLFQSCAVAL
NSTSSTCPAASRQPITSRVAVARSGVFNSTVDTPYLNVYWGTGQLLTLQDAVDTSTQSFY
SVLHTGSSTRRHHGQLEKQSFSNISGVSDARTVTGVGVDYSNQNNNGIQYGWYLELPDAG
ERLVTIPAVRGDLIVFNTTIPGSNGPCTGGASGWLNALSLRNGLQPVRSYNNVQQVFDYN
ADGEVNASDNVNNQVVLSIKTEGEPTSPKFLGDTQYVGQGGTNQVVEMAMDFGIDGLEGR
SAWYQLR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatctgctgagtggtgccctgtgccttgtcgccttgccctgtctggcggccccg
ggggaaatcgcccgcgccccggtcacggaagcgaccggggtccagcccaatatcctgttc
attctggatgattcgggcagcatggcctgggaagatactctcaacaagggggtggaacac
tggagcctccagccggcttcctcgctgatgggttacacaggggtgtattccaagagcctt
gttacggtaagaaacaatcatgatgccgatgatcgtatcgtttcctatacggatcttggc
ggggcgatcggggcctgtatgggcttcaatgtcatggcctacaatcctgcgctgacctac
accccctgggcgggtgctgatcgagcgggaatcgcctatcagaacatgagcctgtcgaat
gtccgtgaagatccctacgagcctaccagctgggccaggatgagcgatgacgcctactac
gtccgctgggacgacaatggtgatggggactatgactacggtgaatgcgggctctaccgg
gatggtgcggggcgcctgtatctggacgaagatcatgtcgttgaagtagaagatctgtcc
gcggcacagcaagtcaatttcgccaactggttcacctactatcgcgaccgcatgctggtg
gccaaatctgccatggccggtgtgatcaacgccaatgagtcccgagtagggctgcgcacc
atccagggccgcaacaatcgcaacgttgcggacatgacggatactgatgaacgtgaagcc
ctgctggaggagctgtttaccgcctatccctccggtggcacccctctgcgtaccgcgctc
aagaatgccggggagtattactccagcactggtcgttcggcccccattctgagtgcggat
gagggcggcatgtgccagcagaactattccatcatgatgaccgatggctactggaatggc
tccagtcccagcgtcggcaacgtcgacggtggcagtggcgacttcatcagtgccagtcac
cgtgacagctattccgatacgcttggcgatgtcgcgatgaaatattatcgcgaggacctg
cggactgacttgatcgacagcgtgccgaccataccgggagtggatgaaaattccgctcag
cacatggtgacctacaccgtcgggttcggcgtggatggctcactgtccgagaaccctgct
gatctcgaatctgcctttacctggccacagccggttgccaacgccaataccaccatcgac
gatctgcgccatgcggcctggaacgggcgtggtgaatatctcagcgccgccaatccgcag
gcattgattgatgcgttgaacaatatcgctcagtcgatcgcaggacgcgcggccagtacc
ggtagcctggacatcagcagtggtgggcagaccagcggcgcgtacgtgattcagaccatc
tatgaccccgctgattggtcgggtgatgtcgttgcacgcaagatcggcaccaatggcacc
ttgagcgccacctcggattggtccgtcgcggagtggttgcgtgacgatgatagccgtagc
tccagtcgcaaggtaattacctataacccgggaatcgcggaagttgacgagaaggccttc
ttcttcgatatcgaggaggccggatcactggaggccgaacaggtactggatctcgtgggt
ttcctcgatgaaaccctgctgtcagaaactctgttggcaacgctgcgtagaaccgttcgg
gatgatgacgatgacgatgacgatgacgacgacgacgacgatgatgatgatgatgatggc
attctaggtggagtcggctcagtggtcggaggcgtcaccaatggcgtggctcagctgacg
ggacgcgtcctggacactaccggtaccttcctgaagctggatggcaccaatcttggcgtc
agaacatcggatctcgagaacctgatcggctatctcaagggtgatgatgcctatgaaggg
accttgttccgcgagcgtgatgacaactatctcggagatatcgtccacgcctccccagcg
atcgtcgggccgccttcggccagctatcgcaatgacatggaagtgtcctcgtaccgctcc
ttcaagacgctgtatgaggatcgccagaacatgatctacatcggtgccaacgacggcatg
ctgcacgccatcgacatggagaccggtgaagagaagttcgcctacatgccgtacgccgcc
ttcagcatcgagaacgggcgtggtattcgccagctcgctgatcagaactatgtccaccag
tactatgtcgatgccacgccagttgcgcgtgacgtgcatgttcaactgggggatgaggat
gcgcccggttggcactcggtcctgttgggtggactgggcgctggtggcaaggcggtctac
atgctggatatcactgatcctgaaggcttcgagtcattgggggagtccaatggcacctcg
ccggccgatatcgtgcagtgggaattcacccacgaggacctcggctataccttcagcgat
atccaggtagcgcgcctggatgatggcaagtggtatgccatcttcggcaatggctacaac
gccgacagcgacggacgtgcaaagttgttcatcgtggacctggaagatcccgacaactat
gcgctgctggattctcaacagggcagcaatgccggtgggtcgtgcacctctgccagcagt
gactgcaatggcatgtcgagtcctgagctggctgacatcgatgccgatggcatcaccgac
tgggtctatgccggcgatctgcatggcaatgtctgggtattcgacatgcgcgacttctcg
ctgagcaacatcggcagcagcgagatgtcgcgtctgttccagtcatgtgccgttgccttg
aacagcacgtcatcgacctgcccggcagcttcccgtcagcccatcacgtcgcgggtagcc
gtggcacgcagcggtgtcttcaacagcaccgtcgatacgccgtacctgaatgtgtactgg
ggcaccgggcaattgctgaccctgcaggatgcggtcgatacctcgacgcaatccttctac
agcgtgctgcataccgggtcttcgactcgtcgtcatcatggccagctggaaaagcagagc
ttctccaatatcagtggcgtgagtgacgcgcgtacggtcacgggggtaggcgtcgattat
tccaatcagaacaacaatggtatccagtacggttggtacctggagctgcctgacgccggt
gagcgcctggtgaccattccggctgtccgcggtgatctgattgtcttcaataccaccatc
ccgggctccaatggcccctgtactggcggggccagtggttggctgaatgccctcagcttg
cgcaacggcctgcaaccggtacgcagttacaacaatgtgcagcaggtctttgattacaac
gcggatggcgaggtcaacgcgagcgacaacgtcaacaatcaggtcgtgctctcgatcaag
acagaaggcgagcccacctcaccgaaattcctgggtgatacccagtatgtcggtcagggt
ggcaccaatcaggtggtcgaaatggccatggacttcgggatcgatgggctggaaggccgt
agtgcctggtatcagctgcgctag
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