KEGG   Cobetia sp. D5: U0O11_00550
Entry
U0O11_00550       CDS       T10202                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
cobd  Cobetia sp. D5
Pathway
cobd00300  Lysine biosynthesis
cobd00470  D-Amino acid metabolism
cobd01100  Metabolic pathways
cobd01110  Biosynthesis of secondary metabolites
cobd01120  Microbial metabolism in diverse environments
cobd01230  Biosynthesis of amino acids
Module
cobd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:cobd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    U0O11_00550 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    U0O11_00550 (lysA)
Enzymes [BR:cobd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     U0O11_00550 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: WVS98721
LinkDB
Position
complement(118901..120172)
AA seq 423 aa
MDHFVYQDGVLHAEDVSLATLAEQFGTPCYVYSRATLERHFKAYQDALGDHPHLICYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVIKAGGDPAKVVFSGVAKQAGEMERALELGIK
CFNVESLPELERLNAVAGRLGRVAPVSLRINPDVDAGTHPYISTGLKANKFGIPVEQALE
VYEIAHAMEHVQVVGADCHIGSQLTELAPFLDSLERLLVLLDRLRERGIVIEHLDLGGGL
GVPYQNETPPEPFAYASALLERLARYEHGSEMTLLFEPGRSIAANAGVLLTRVEYLKPGE
EKNFAIIDAGMNDLIRPSLYQAWQNIVTVDTRETRKSASYDVVGPVCETGDFLGKDRELA
IAPGDLLAVRSSGAYGFVMASSYNSRCRPAEVMVDGPEMHLVRRRERLEELWTGEQLLPE
GDA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggatcacttcgtttatcaggatggcgtgctgcacgccgaagacgtctcgctcgccacg
ctggccgagcagttcggcacgccgtgctacgtctacagccgtgccacgctcgagcgccac
ttcaaggcctatcaggatgcgctgggcgaccacccgcatctcatctgctatgccgtgaag
gccaattccaacctggcggtgctcaatgtgctggcacgcctgggcgccggcttcgacatc
gtctccgccggtgagctggagcgcgtcatcaaggccggcggcgaccccgccaaggtggtc
ttctccggcgtcgccaagcaggcaggcgagatggaacgtgcgctggagctgggcatcaag
tgcttcaacgtcgagtcgctgccggagcttgagcgcctcaacgccgtcgccggccgtctc
ggacgcgtcgcgccggtgtcactgcgcatcaatcccgacgtcgatgccggcactcacccg
tacatctccactggcctcaaggccaacaagttcggcattccggtcgaacaggcgctggag
gtctacgagatcgcccacgccatggagcacgtgcaggtggtcggcgccgactgccatatc
ggctcccagctgaccgagctggcacccttcctcgattccctcgaacgcctgctggtgctg
ctggatcgcctgcgtgaacgcggcatcgtcatcgagcacctcgatctcggcggcggcctc
ggcgtgccctaccagaacgagaccccaccggagcccttcgcctacgccagcgccctgctg
gagcgtctggcccgctatgagcacggcagcgagatgacgctgctgttcgaaccgggccgc
tccatcgccgccaacgccggcgtgctgctgacccgtgtcgagtacctcaagcccggtgaa
gagaagaacttcgccatcatcgatgccggcatgaatgacctgatccgtccgtcgctgtac
caggcgtggcagaacatcgtcaccgtcgacacgcgcgagacacgcaagtccgccagctac
gatgtggtcggcccggtctgcgagaccggtgacttcctcggcaaggaccgcgaactggcc
atcgcgccgggcgacctgcttgccgtgcgctcctccggtgcctacggcttcgtcatggcc
tcgagctacaacagccgctgccgtcctgccgaggtgatggtcgatggccccgagatgcac
ctggtgcgtcgtcgcgagcgcctcgaagaactgtggaccggtgagcaactgctgccggaa
ggtgatgcctga

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