Cobetia sp. D5: U0O11_00890
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Entry
U0O11_00890 CDS
T10202
Symbol
tyrS
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
cobd Cobetia sp. D5
Pathway
cobd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0O11_00890 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cobd01007
]
U0O11_00890 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobd03016
]
U0O11_00890 (tyrS)
03029 Mitochondrial biogenesis [BR:
cobd03029
]
U0O11_00890 (tyrS)
Enzymes [BR:
cobd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
U0O11_00890 (tyrS)
Amino acid related enzymes [BR:
cobd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
U0O11_00890 (tyrS)
Transfer RNA biogenesis [BR:
cobd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
U0O11_00890 (tyrS)
Prokaryotic type
U0O11_00890 (tyrS)
Mitochondrial biogenesis [BR:
cobd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
U0O11_00890 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
WVS98782
LinkDB
All DBs
Position
193690..194898
Genome browser
AA seq
402 aa
AA seq
DB search
MSDKSVVEALEIIKRGTDEVLVEEELIKKLESGRKLKVKAGFDPTAPDLHLGHTVLINKL
RQLQDLGHEIIFLIGDFTGRIGDPTGKSVTRKPLTEEDVKANALTYQEQVFKILDKEKTR
IAFNSEWINKLSAGDMIELAASSTVARMLERDDFDKRYNGNQPISIHEFLYPLIQGYDSV
ALEADIELGGTDQKFNLLMGRELQRQRGQEPQVVITMPILEGLDGVQKMSKSLGNYIGIN
DRPGEMFNKIVSMPDSLMWRYFELLSLRPLDEVKALMASIDDGANPRDIKMELARELVAR
FHDEEAAATAHLSSGNQLADGELPADMPDVTVSLEGAEVAPIAAVINRAGLANNSAQAKD
MLKNGRVKVDGEVVEPSYMAPFDTAIVIQAGKKRYARVTVTR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagtcagtagtggaagcgctggagatcatcaagcgcggtaccgatgaggtg
ctggtcgaggaagagctgatcaagaagctcgagtccgggcgcaagctcaaggtcaaggca
ggctttgatccgacggcgccggacctgcacctcggtcatacggtgctgatcaacaagctg
cgccagctgcaggacctcggtcacgagatcatcttcctgatcggtgatttcaccggccgc
atcggcgaccccaccggcaagagcgtgacgcgcaagccgctgaccgaagaggacgtgaag
gccaacgccctgacgtatcaggagcaggtcttcaagatcctcgacaaggagaagacgcgc
atcgccttcaactccgaatggatcaacaagctctccgcgggtgacatgatcgagctggcg
gcctccagcacggtcgcgcgcatgctcgagcgtgacgatttcgacaagcgctataacggc
aatcagccgatctccatccatgagtttctctacccgctgatccaggggtatgactccgtg
gcactggaagcggacatcgagcttggcggcaccgaccagaagttcaatctgctgatgggg
cgtgagctgcagcgccagcgcgggcaggagccgcaggtcgtgatcaccatgccgatcctc
gagggcctggatggtgtgcagaagatgtccaagtcgctgggcaactacatcggcatcaac
gaccgcccgggcgagatgttcaacaagatcgtctccatgccggattcgctgatgtggcgt
tacttcgagctgctgtcgctgcgtcctctcgatgaagtgaaggcgctgatggccagcatc
gatgacggtgccaacccgcgtgatatcaagatggagctggcgcgcgagctggtggcacgc
ttccacgatgaagaagcggcggcgacggcacacctttccagcggcaatcagctggccgac
ggcgagctgccggcggacatgccggatgtcaccgtcagcctggagggcgccgaggtggcg
ccgatcgcggcggtcatcaatcgcgcgggcctggccaacaatagtgcccaggccaaggac
atgctcaagaatggtcgcgtgaaagtggatggcgaagtggtcgagccttcctatatggca
cctttcgataccgccatcgtcatccaggcgggcaagaagcgctacgcgagagtgaccgtg
acgcgctga
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