Cobetia sp. D5: U0O11_02210
Help
Entry
U0O11_02210 CDS
T10202
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cobd Cobetia sp. D5
Pathway
cobd00260
Glycine, serine and threonine metabolism
cobd00460
Cyanoamino acid metabolism
cobd00630
Glyoxylate and dicarboxylate metabolism
cobd00670
One carbon pool by folate
cobd00680
Methane metabolism
cobd01100
Metabolic pathways
cobd01110
Biosynthesis of secondary metabolites
cobd01120
Microbial metabolism in diverse environments
cobd01200
Carbon metabolism
cobd01230
Biosynthesis of amino acids
cobd01240
Biosynthesis of cofactors
cobd04981
Folate transport and metabolism
Module
cobd_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U0O11_02210 (glyA)
09102 Energy metabolism
00680 Methane metabolism
U0O11_02210 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U0O11_02210 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
U0O11_02210 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U0O11_02210 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
U0O11_02210 (glyA)
Enzymes [BR:
cobd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
U0O11_02210 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WVS99015
LinkDB
All DBs
Position
500687..501997
Genome browser
AA seq
436 aa
AA seq
DB search
MSQQHGYTRDDRLARLDPALAEAILEETARQEAHIELIASENYASPLVMEAQGSQLTNKY
AEGYPGKRYYGGCEFVDKVETLAIERACALFGCDFANVQPHSGAQANAAVFMALVSPGDT
ILGMSLAHGGHLTHGAAPNFSGKHYNAIQYGLTESGELDYEEMERLAREHKPKMIIAGFS
AYSRVVNWRRFRDIADEIGAWLMVDMAHVAGLVAAGHYPSPLPYAHVVTTTTHKTLRGPR
GGLILSATGDEALHKKLNGAVFPGQQGGPLMHVIAAKAAAFKEAMSQDFVSYQARVIANA
RVMAEVFMARGYDVVSGGTDDHLFLVSLIRQGVTGKDADASLGRAHITVNKNSVPNDPQS
PFVTSGLRIGTPAATTRGFGEAECEALAGWICDLIDALSTGESAKVEAEVRGKVEEVCAR
FPVYASNSVTDPAALA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaacatggctacacccgtgatgaccgactggccagactcgaccctgcactg
gccgaggccattctcgaagagacagcgcgtcaggaagcgcatatcgagctgatcgcctcc
gagaactatgcaagcccgctggtgatggaggctcagggcagccagctgaccaacaagtac
gccgaaggctatccgggcaagcgctactacggcggctgcgaattcgtcgacaaggtcgag
acgctggccatcgagcgcgcctgtgcgctgttcggctgtgacttcgccaacgtgcagccg
cactccggcgcccaggccaacgcggcggtgttcatggcactcgtctcgccgggtgacacc
atcctcggcatgagcctggcgcatggcggccacctgacccacggcgcggcacccaacttc
tccggcaagcactacaacgccatccagtacggcctgaccgaaagcggcgagctggactac
gaggagatggagcgtctggcgcgcgagcacaagccgaagatgatcatcgccggcttctcc
gcctactcgcgcgtggtcaactggcgtcgcttccgcgatatcgccgacgagatcggcgcc
tggctgatggtcgacatggcccacgtggctggtctggtcgcggcgggtcactacccgagc
ccgctgccctacgcccatgtcgtcaccaccaccacgcacaagacgctgcgcggcccgcgc
ggtggcctgattctctccgccaccggcgatgaagcgctgcacaagaagctcaatggcgcc
gtcttccccggccagcagggcggcccgctgatgcacgtcatcgccgccaaggccgcggcc
ttcaaggaagcgatgagccaggacttcgtcagctatcaggcccgcgtgatcgccaatgcc
cgcgtgatggccgaggtcttcatggcgcgcggctatgacgtggtctccggcggcaccgat
gaccacctgttcctcgtctcgctgatccgccaaggcgtgaccggcaaggacgcggatgcc
tcactgggccgcgcccacatcaccgtcaacaagaacagcgtgccgaatgacccgcagagc
cccttcgtgacctccgggctgcgcatcggcaccccggctgctaccacgcgcggcttcggc
gaggcggaatgcgaggcactggccggctggatctgtgatctgatcgacgcgctgtccacc
ggcgagagcgccaaggtggaagccgaggtgcgcggcaaggtcgaggaagtttgtgcccgc
ttcccagtctacgcatcgaacagcgtgaccgaccccgccgcgcttgcctga
DBGET
integrated database retrieval system