Cobetia sp. D5: U0O11_02365
Help
Entry
U0O11_02365 CDS
T10202
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cobd Cobetia sp. D5
Pathway
cobd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U0O11_02365 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobd03400
]
U0O11_02365 (recC)
Enzymes [BR:
cobd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U0O11_02365 (recC)
DNA repair and recombination proteins [BR:
cobd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U0O11_02365 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
tRNA_int_end_N3
Motif
Other DBs
NCBI-ProteinID:
WVS99045
LinkDB
All DBs
Position
543565..547635
Genome browser
AA seq
1356 aa
AA seq
DB search
MFTVLHANHLEDLRDLALKVIKAAPQPPLVPETFLVQSNGMAQWLRLSLAEADGIAASVD
FPLPSSFVWRAYRGVLGGVLGDEIPELSPFDKGPLAWRLLRLLPGLLADESQAECYAPLR
DYLCRDERGQLIEAVGEDALPALPEGPEAERQQWQLACQLADLFDQYLNYRPEWVRSWES
GLEDDNFRDAFARQQAASELPANLLPDNLPDSQQWQPALWRAVLADAPSSSRQHHRAALH
GRFVAAARALETLPSTRRHPLPPRLFVFGISALPGQTLDALHALSGVMDIYLMITNPCRH
YWGDIVSDREAVRRSSRADSQRMDSERLAQQRARHPEAPALIGLAEEELHLKANPLLAGL
GAQGRDFIVSLYEFESALSGRDSGFDLELDVFVPRISEDTPPEQAPLLQQIQDEILELVH
PGERALAEGSPRVLAADDDSISLVSAHSALREVEILHDRLLAAFERAHDAEKRGEGEPLR
PRDILVMVPDIDRYAPYIEAVFGQLPPGNPRHIPFTIADRVASQANPLLGLVLMLLELPE
RRLGVSEVLDALDVAAFRRRFAIEEGELERLRRWLADSGVRWGLSGEHREQLGFMPLDEN
SWRFGLERMLLGYATGAPEAGSPAAGRPAQGGVGDEQSADLMDGQMDDLMDGLVDMNGLS
FDGVVPFDEVAGLEAELAGKVGELIESLDRWRRWLDTSRTPADWATTLQRLWEESLSPDS
AEEFDILARLQAALSRLDKGWQQAGFEGCLSLKVVREALRGELDSGGLAQRFLAGRVNFA
TLMPMRAIPFREVHLLGMNDGDYPRVRMPQDFDLMASRPQAGDRSRRDDDRYLFLEALLA
ARDRLSISWVGRDQRDNGERPPSVLVGELLDYIELGWEPEQPHSAKCSREAALRERLITE
HPLQPFSRRYFHASQAAVVDLFSYDASWSSLYRAAGQAQVPEKTQENPSETEANSTAATA
LRQLVEQAPESHLRLGADSLARFLRRPWQLGLDRVGVRFRDAEVPDEDNEPFAPDGLENF
TLTRELLDAALAGQSLPLAAERLRRAGRLPALGFADALIEPRLKRLDQQLASWRDQLSDA
ISLPPRTLEVPLIMQDEGGEMLRVTLTTRLISRQQLHDDAEGESRLLATLEATHFGTLKP
GKEGRYKKLGKPHRLLAGYLDWLMANARPGLGEVAGDQGASREGYQWLAVFEDRWLLFPA
LRIEQAEAALRHLVKAYAQGWQAPLAAALELATTLWEVVGEEDRNALFGALKAQAADGSA
NLETALGAIHKPWLGESLTRAMETRFSEDIFKGPQALRRQEGALGELWPEFEAFAQAGGV
LNSVQLYQPLIESMIGVRQGILGERAVELATGKATS
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgttcttcacgccaatcacctcgaggacctgcgcgatctggccctcaaggtg
atcaaggccgcgcctcagcctccgctggtgccggaaaccttcctcgtccagtccaacggc
atggcccagtggctgagattgtcattggccgaggccgatggcatcgccgcctcggtggat
tttccactgccctcaagcttcgtgtggcgcgcctatcgcggggtattgggcggcgtgctg
ggcgacgagattccggagctgtcgcccttcgacaagggcccgcttgcctggcgtctgctg
cgcctgctgccggggctgctggccgatgaatcccaggccgaatgctatgcgccgctcagg
gattacctgtgccgcgacgagcgtggccagctgatcgaggcggtcggtgaggacgcattg
ccagcgctgcccgaaggcccggaggccgaacgtcagcagtggcagctggcctgccagctg
gcggacctgttcgatcagtacctcaactatcgccccgagtgggtgcgcagttgggagagc
gggcttgaagacgacaacttccgggatgccttcgcgcgccagcaggccgcaagcgagctg
ccggccaatctgctgcccgacaacctgccggacagccagcagtggcagccggcactgtgg
cgcgcggtactggccgatgcgccatccagcagccgccagcatcaccgcgccgccctgcat
ggtcgcttcgtcgcggcggcgcgcgcgctggagacactgccctcgacccgccgtcatccg
ctgccgccacgcctgttcgtgttcggtatctcggcgttgccgggccagacgctggatgcg
ctgcatgcgctgtccggtgtgatggacatctacctgatgatcaccaatccctgccgccat
tactggggcgatatcgtctccgaccgcgaagccgtgcggcgcagttcgcgagcagacagc
cagcgcatggacagcgagcgcctcgcgcaacagcgtgcccgtcaccccgaggcgccggcg
ctgatcgggctggcggaggaggagttgcacctcaaggccaatccgctgctggcagggctt
ggcgcacaggggcgtgacttcatcgtcagcctgtatgaattcgagagtgcgctgtcgggg
cgcgacagcggcttcgatctcgagctggacgtcttcgtgccgcgcatcagcgaggacacg
cctcccgagcaggcaccgctgctgcagcagatccaggacgagatactcgagctggtccat
cccggcgagcgtgcgctggccgagggcagtccgcgggtgctcgcggccgatgacgactcc
atcagtctggtcagcgcccactcggcgctgcgcgaggtcgagatcctccacgaccgcctg
ctggcggccttcgagcgggcccatgacgccgagaaacgtggcgagggcgagccgctgcgg
ccgcgcgacatcctggtgatggtgccggacatcgaccgatatgccccctatatcgaggcg
gtgttcggtcagctgccgccgggcaatccacgccatattcccttcaccatcgccgaccgc
gtggccagtcaggccaacccgctgctcgggctggtgctgatgctgctggaactgccggag
cgccgcctcggcgtcagcgaggtgctggatgcgctggatgtcgccgccttccggcgtcgt
ttcgccatcgaggagggcgagctcgagcgtctgcggcgctggctggccgacagcggcgtg
cgctggggactctccggcgagcaccgcgagcagctcggcttcatgcccctcgacgagaac
agctggcgcttcggcctcgagcgcatgctgctgggctacgccaccggggccccggaggcc
ggctctccggcggccggccgccccgcgcaggggggagttggcgatgagcagagcgccgac
ctgatggacggccagatggacgatctgatggacggccttgtcgacatgaacggcctgagc
ttcgacggcgtggtgcccttcgatgaagtggccggtctcgaggccgagctggcaggcaag
gtcggcgagctgatcgagagtctggatcgctggcggcgctggctggatacctcgcgcacg
ccagcggactgggccaccacgctgcagcggctgtgggaagagagcctcagcccggacagc
gccgaggaattcgacattctggcgcgtctgcaggcggcgctctcacgcctcgacaagggc
tggcagcaggccggtttcgagggctgtctgtcgctcaaggtggtgcgcgaggcactgcgc
ggcgagctggacagcggcggtctcgcccagcgcttcctcgccgggcgcgtcaacttcgcc
accctgatgccgatgcgtgcgattcccttccgcgaagtgcacctgctgggcatgaacgat
ggcgactacccgcgggtgcgcatgccgcaggatttcgatctgatggccagccgcccgcag
gcgggcgaccgctcgcgccgcgacgatgatcgctacctgttcctggaggcgctgctggcg
gcgcgggaccgcctgtcgatctcgtgggtcgggcgtgaccagcgcgacaacggcgagcgg
ccgccctcggtgctggtcggtgagctgctcgattacatcgagttgggctgggagcccgag
cagccgcactccgccaagtgttcgcgtgaggcggcgctgcgtgagcgcctgatcaccgag
cacccgctgcagccgttctcgcggcgctatttccatgcctcccaggcggcggtcgtcgat
ctgttcagctatgacgccagctggtcgagcctgtatcgcgcggcgggacaggctcaagta
cctgaaaaaactcaggaaaaccccagtgagaccgaggcgaattcgacggcagcgactgcc
ttgaggcagctggtggagcaggcgccggaatcccatctgcgcctcggtgccgattcgctg
gcgcgcttcctgcgccgcccctggcagctggggctggaccgcgttggcgtgcgcttccgc
gatgccgaggtgccggatgaagacaacgaacccttcgcccccgacgggctggagaacttc
accctgacccgcgagctgctggacgccgcgcttgccgggcagtcactgccgctggccgcc
gaacgtctgcgccgggccgggcggctgccggcactgggctttgccgatgccttgatcgaa
ccgcgcctcaagcgcctggatcagcagttggccagctggcgtgaccagctcagcgatgcc
atctcgctgccgccgcgcactctcgaggtaccgctgatcatgcaggatgagggcggcgag
atgctgcgcgtgactctcaccacgcgcttgatcagccgtcagcagctgcacgatgacgcc
gagggcgaaagccgcctgctggccacgctggaggcgacccacttcggcaccctcaagccc
ggcaaggaagggcgctacaagaagctcggcaagccgcatcgtctgctggccggctatctc
gactggctgatggccaacgcgcgccccggcctcggggaagtggcaggcgatcagggcgca
agccgtgaaggctatcagtggcttgcggtgttcgaggaccgctggctgctgttccccgcg
ctgcgtatcgagcaggccgaggccgcgctgcgccatctcgtcaaggcgtatgctcagggc
tggcaggcgccactggcggccgcgctggaactggcgaccaccctctgggaggtggtgggc
gaggaggatcgcaatgccctgttcggcgcgctcaaggcgcaggccgctgacggcagcgca
aaccttgagacggcgctcggggccattcacaagccctggcttggtgagagtctgactcgc
gccatggaaacccgcttcagcgaagacatcttcaagggcccccaggcgctcaggcggcag
gaaggcgcactgggcgagctgtggccggagttcgaggcatttgcacaggccggcggcgtg
ctcaacagcgtgcagctctaccagccactgatcgagagcatgatcggcgtgcgtcagggc
attctcggcgaacgcgcggtggagcttgccaccgggaaggcgacgtcatga
DBGET
integrated database retrieval system
