Cobetia sp. D5: U0O11_02945
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Entry
U0O11_02945 CDS
T10202
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cobd Cobetia sp. D5
Pathway
cobd00071
Fatty acid degradation
cobd00280
Valine, leucine and isoleucine degradation
cobd00310
Lysine degradation
cobd00362
Benzoate degradation
cobd00380
Tryptophan metabolism
cobd00410
beta-Alanine metabolism
cobd00640
Propanoate metabolism
cobd00650
Butanoate metabolism
cobd00907
Pinene, camphor and geraniol degradation
cobd00930
Caprolactam degradation
cobd01100
Metabolic pathways
cobd01110
Biosynthesis of secondary metabolites
cobd01120
Microbial metabolism in diverse environments
cobd01200
Carbon metabolism
cobd01212
Fatty acid metabolism
Module
cobd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
U0O11_02945 (fadB)
00650 Butanoate metabolism
U0O11_02945 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
U0O11_02945 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
U0O11_02945 (fadB)
00310 Lysine degradation
U0O11_02945 (fadB)
00380 Tryptophan metabolism
U0O11_02945 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
U0O11_02945 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
U0O11_02945 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
U0O11_02945 (fadB)
00930 Caprolactam degradation
U0O11_02945 (fadB)
Enzymes [BR:
cobd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
U0O11_02945 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
U0O11_02945 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
U0O11_02945 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
U0O11_02945 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
WVS99148
LinkDB
All DBs
Position
701391..703541
Genome browser
AA seq
716 aa
AA seq
DB search
MIYSGKTLTVEANQDAIALLTLDLEGESVNKLASYVLKELGEAVEAIKATADLKGLVIRS
AKEAFVVGADITEFHQMFEKDEAFLIDMNMNIHGIFNAIEDLPFPTVTAINGLALGGGCE
ITLTTDFRVMADSARIGLPETKLGIIPGWAGCVRLPRLIGADNAIEWICGGTENRADKAL
AVGAVDAVLPVAELDAAALDILARANTGELDYQARRLEKTSPLKLNAIEQMMAFETAKGF
VAGKAGPHYPAPVEAIKVIQKGAGESRERAQAIEAKTFARMALTDVAFNLVGLFMNDQVV
KKKAKGYEKQASEIKQAAVLGAGIMGGGIAYQSASKGTPILMKDINGEAIELGLKEARKL
FGKGVERGKLTTEKMAQGLSNIRPTLSYGDFGNVDLVVEAVVENPKVKASVLAELEDNVA
EDAILTSNTSTISITRLAESLKRPENFCGMHFFNPVHRMPLVEVIRGEKSSDAAIAATVA
YARQMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEKGADYQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHANAVMAEGFPDRMARDGKTAIQVMYDNKRLGQKNDLGFYRYEEDRKGKP
KKLADDEAQALVAQVVSETREFSDEDIIARMMVPLCMETIRCLEDDIVGSPAEADMALIY
GIGFPPFRGGALRYVDAMGVAEFVALADSLADELGPLYRPTEALRERAKRGEAFYS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctattcaggcaaaacgctaaccgtcgaggccaatcaggacgccatcgccctgttg
accctcgatcttgaaggcgaatcggtcaacaagctggccagctacgtactcaaggagctg
ggagaggcggtcgaggccatcaaggcgacggccgatctcaaggggctggtcatccgctcc
gccaaggaagcgttcgtggtcggtgccgacatcaccgagttccatcagatgttcgagaag
gatgaagccttcctcatcgacatgaacatgaacatccatggcatcttcaatgccatcgag
gatctgccgttccccaccgtcactgccatcaatgggctggcgctgggcggcggctgcgag
atcaccctgaccaccgatttccgggtcatggccgacagcgccaggatcggcctgccggaa
accaagctcggcatcatcccgggctgggcgggctgtgtacgactgccgcgtctgatcggg
gcggacaacgccatcgagtggatctgtggtggcaccgagaaccgtgccgacaaggcgctg
gcagtgggcgccgtcgatgccgtcctgccggtggccgagctggatgcggcggcactcgac
attctggcgcgtgccaataccggcgagctggactatcaggcgcgtcgtctcgagaagacc
tcgccgctcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtggccggcaaggccggtccgcactatccggcgccggtggaggccatcaaggtcatccag
aagggcgcgggggaatcgcgtgagcgtgcccaggccatcgaggccaagaccttcgccagg
atggcgctgaccgacgtggccttcaatctggtcggcctgttcatgaacgatcaggtggtc
aagaagaaggccaagggttacgagaagcaggccagcgagatcaagcaggccgccgtgctg
ggggccggcatcatgggcggcggcatcgcctatcagagcgccagcaagggcacgccgatc
ctgatgaaggacatcaacggcgaggctatcgaactgggcctgaaggaggctcgcaagctg
ttcggcaagggggtcgagcgcggcaagctgaccaccgagaagatggcgcagggcctgtcc
aacatccgcccgacgctgtcctacggtgacttcggcaatgtggacctggtcgtcgaggcg
gtggtcgagaatcccaaggtcaaggcctcggtgctggccgagctcgaggacaacgtcgcc
gaggacgccatcctgacctccaacacctcgaccatctccatcacgcggctggccgagtcg
ctcaagcgtcccgagaacttctgcggcatgcacttcttcaacccggtgcaccgcatgccg
ctggtcgaggtcatccgtggcgagaaatccagcgatgcggccatcgccgcgaccgtcgcc
tatgcccgccagatgggcaagacgccgatcgtcgtcaacgactgcccgggctttctggtc
aaccgcgtgctgttcccctacttcggtggcttcagcctgctggtcgagaagggcgccgac
tatcagcgcgtcgacaaggtgatggagaagttcggctggccgatgggtccggcctacctg
ctggatgtggtcggcatggataccgcggtgcacgccaatgccgtgatggcggaaggcttc
ccggaccgcatggcgcgtgacggcaagaccgccatccaggtgatgtacgacaacaagcgc
ctcggccagaagaacgatctgggcttctaccgctacgaggaagaccgcaagggcaagccg
aagaagctggcagatgatgaggctcaggcgctggtggcacaggtcgtcagcgagacgcgc
gaattctccgatgaagacatcatcgcgcgcatgatggtgccgctgtgcatggaaaccatc
cgctgcctggaagacgacatcgtcggcagcccggccgaggccgacatggccttgatctac
ggcatcggcttcccgccgttccgtggtggcgcactgcgctatgtcgacgccatgggcgtg
gccgagttcgtcgcactggccgacagcctggccgatgagctggggccgctgtatcgcccg
accgaggcgctgcgcgagcgcgccaagcgtggcgaagccttctactcctga
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