Cobetia sp. D5: U0O11_03620
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Entry
U0O11_03620 CDS
T10202
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cobd Cobetia sp. D5
Pathway
cobd00470
D-Amino acid metabolism
cobd00550
Peptidoglycan biosynthesis
cobd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0O11_03620 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U0O11_03620 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobd01011
]
U0O11_03620 (murD)
Enzymes [BR:
cobd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
U0O11_03620 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cobd01011
]
Precursor biosynthesis
Amino acid ligase
U0O11_03620 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
NAD_binding_2
NAD_binding_8
CbiA
Motif
Other DBs
NCBI-ProteinID:
WVS99270
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Position
850291..851802
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AA seq
503 aa
AA seq
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MTLSVTSQAPASPVPAKGPTLVVGLGVSGQAIARHLSDRGIDFAVADTRSAPPGLESLRE
HAPQAEVHLGPLESLDLSRFGEVVLSPGIDPRQAVFDGVRERLVGEIALFVRALDERQAR
DAQGKRPTLVAITGSNAKSTVTTLIAQMAARAGRDVAVGGNLGTAALTLLREQPDAELYV
LELSSFQLETTPELKADVACFLNLSEDHLDRHDGMRGYQAAKRGIFRGAGLAVINADDAW
SWPAENDAVARVSFSVQLGESADESTDEAARQAQWRLAEQGGTLSLCHVESGQLRGVMPA
AEVRLAGRHNQANALAALAMGTAIGLDETAMVAELASFAGLPHRGELIAEVAGVRWINDS
KGTNVGATLAAIAGLGPTLEGKLILLAGGQGKGADFTPLAAPLARYAREAVVFGQDAPLL
TQALADGVTVTPVMTLLEAMRHARQIAQVGDCVLLSPACASLDQFPNYMARGDAFRDWVT
QHIMPGADCNSGPGGSDKEACDA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctctgtcacctcccaagcaccggcctcgccggtgcctgccaaaggaccgacc
ctggtggtcggtcttggtgtctccggacaggcgatcgctcgccatctgagtgatcgcggc
atcgactttgccgtcgccgatacccgcagcgcaccgccgggcctcgagagcctgcgcgag
catgcgccgcaggccgaggtgcatctcggcccactggaatcgctggatctgtcacgcttc
ggcgaggtggtgctcagtccgggcattgacccgcgtcaggcggtgttcgatggggttcgc
gagcgactggtcggcgagatcgcactcttcgtgcgtgcgctggacgagcgtcaggcccgc
gatgcgcagggcaagcggcccacgctggtcgcgatcaccggctcgaacgccaagtccacc
gtgaccacgctgatcgcgcagatggccgcgcgtgccggtcgtgacgtggcggtcggcggc
aatctgggcaccgccgcgctgaccttgttgcgtgagcagcctgatgccgaactctacgtg
ctggagctgtcttccttccagctcgagaccacacctgagctcaaggccgatgtcgcctgc
ttcctgaatctctctgaagatcatcttgatcgccacgatggcatgcgcggctatcaggcc
gccaagcgcggcatcttccgcggcgcaggccttgcggtcatcaatgccgatgacgcctgg
agctggccggccgagaatgatgcggtggcgcgagtcagcttcagcgtgcagctcggtgag
tcggccgatgagtcgaccgatgaggctgccaggcaggcgcaatggcgcctggcggagcag
ggcggcacgctgtcgctgtgtcatgtcgagtctggccagctgcgcggcgtgatgcctgct
gcggaggtgcgtcttgcaggccgccacaaccaggccaatgcgctggcggcactcgcgatg
ggcacggcgatcggcctcgacgagacggcgatggtcgccgagctagcaagcttcgcgggc
ttgccgcatcgcggcgagctgatcgccgaggtggcgggcgtgcgctggatcaatgattcc
aagggcaccaatgtcggggcgacgctggcggcgattgccggtctcggcccgacgctcgag
ggcaagctgatattgctggccggcggccagggcaagggcgcggatttcacgccgctggcg
gcgccactggcccgttacgcccgtgaggcggtggtgttcggacaggatgcgccgctattg
acgcaagccctggccgatggcgttaccgtgacgccagtcatgacgctgttggaggccatg
cgtcatgctcgacagatcgctcaggtgggggactgcgtactgctgtcaccggcctgcgcc
agtctcgatcagttccccaattacatggcgcgcggcgacgcgttccgtgactgggtcacg
cagcacatcatgcccggtgcagactgcaattctggccctggcggcagcgacaaggaagcc
tgcgatgcgtaa
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