Cobetia sp. D5: U0O11_04555
Help
Entry
U0O11_04555 CDS
T10202
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cobd Cobetia sp. D5
Pathway
cobd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U0O11_04555 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobd03400
]
U0O11_04555 (xthA)
Enzymes [BR:
cobd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
U0O11_04555 (xthA)
DNA repair and recombination proteins [BR:
cobd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
U0O11_04555 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WVS99449
LinkDB
All DBs
Position
complement(1068340..1069152)
Genome browser
AA seq
270 aa
AA seq
DB search
MRLISFNINGIRARPHQLEALIEAHQPEVIGLQETKVQDSEFPHAHIEALGYHVVWHGQK
GHYGVAMLTRQVPKKVHYGMPDDDEDAQKRMIGVEIDGPNGEPLIVYNGYFPQGENIEHP
VKFPYKTRFYQQLFRLLEEDHQPEQHVVVMGDYNISATDRDIGIGEPNRKRWLREGKTSF
QPIEREWMERLYAWGLTDSFRHVHPEVDDQFSWFDYRSRGFEREPRRGLRIDLIMTSPGL
TPLIKDSGVDYALRGMEKPSDHAPVWTDIG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatttccttcaacatcaacggcatccgtgcgcgtccgcatcagctggaagcg
ctgatcgaggcacatcagccggaagtcattggcctgcaggaaaccaaggtgcaggacagt
gaattcccccacgcgcacatcgaggcgctgggctatcacgtggtctggcacggccagaag
ggccactacggcgtcgcgatgctgacccgtcaggtgccgaagaaggtgcactacggcatg
ccggatgacgacgaggatgcccagaagcgcatgatcggcgtcgagatcgacggcccgaac
ggcgagccgctgatcgtctacaacggctacttcccccagggcgagaatatcgagcacccg
gtgaagttcccctacaagacgcgcttctatcagcaactgttccgcctgctggaagaagac
caccagcccgagcagcacgtggtggtgatgggcgactacaacatctcggccactgaccgc
gacatcggcatcggcgagcccaaccgcaagcgctggctgcgcgaaggcaagaccagcttc
cagcccatcgagcgcgagtggatggaacgcctctacgcctggggcctgaccgacagcttc
cgccacgtgcacccggaagtcgatgaccagttcagctggttcgactaccgctcacgcggc
ttcgagcgtgagcccaggcgcggcctgcgcatcgacctgatcatgaccagccccggcctg
actccgctgatcaaggattccggtgtcgactacgcactgcgtggcatggaaaagccgtcg
gatcacgccccggtgtggaccgatatcggctga
DBGET
integrated database retrieval system
