Cobetia sp. D5: U0O11_05540
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Entry
U0O11_05540 CDS
T10202
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
cobd Cobetia sp. D5
Pathway
cobd00190
Oxidative phosphorylation
cobd01100
Metabolic pathways
cobd02020
Two-component system
Module
cobd_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
U0O11_05540 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0O11_05540 (cydB)
Enzymes [BR:
cobd01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
U0O11_05540 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
WVS99637
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Position
1306169..1307302
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AA seq
377 aa
AA seq
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MWDYEILKLFWWVAVGLLLIGFVITDGMDMGAAMLMPLVSRNDSERRVVINTLAPHWDGN
QVWLVTAIGAVFAVWPVVYGAVFSSFYFAMLTILFSLFFRPLGFDYRSKLENTQWRGWWD
RGIVAGSLIPTAFFGLIFGNLLQGVPLEVDQFMRASYAGSYLGLFNPFALLCAALSVVMV
MLHGGTWLVARADEAVAARSARLVQPLGLLTLGLFALGGLWVWLSGMGYSIDQMGDTASA
LKLLDKQVGPGSWLDVYAREPLTLLAPLSAVVGVLAAMVLSARRKGGAAFTASSVGVGGV
VATAGISMFPFIVPSSRMSEASLTLWDSVSSELTLSIVTVAGLVMVPTIILYTTWCYVKM
WRRVTVAHIEQDGHSLY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgggattacgagatcctcaagctgttctggtgggtggcggtagggctgctgctgatc
ggcttcgtcatcaccgatggcatggacatgggtgcggcgatgctgatgccgctggtcagc
cgcaatgacagcgagcgccgcgtggtgatcaataccctggcgccgcactgggatggcaat
caggtatggctggtcacggccatcggtgcggtgttcgcggtgtggccggtggtctacggc
gccgtgttctccagcttctatttcgcgatgctgaccatcctgttctcgctgttcttccgc
ccgctgggctttgactatcgctccaagctcgagaacacccagtggcgtggctggtgggac
cgcggcatcgtcgccggcagcctgattcccaccgccttcttcgggctgatcttcggcaac
ctgctgcagggcgtgccgctggaagtcgatcagttcatgcgtgccagctacgccggcagc
tacctgggcctgttcaaccccttcgccttgctgtgcgctgcgctgtcggtagtgatggtg
atgctgcatggcggtacctggctggtggcgcgtgccgatgaggccgtcgccgcacgcagc
gcgcgtctggtgcagccgctgggccttttgacgctggggctgttcgcgctgggcggcctg
tgggtgtggctgtccggcatgggctacagcatcgatcagatgggcgataccgcctcggcc
ctgaagctgctcgacaagcaggtcgggccgggcagctggctggatgtctatgcgcgtgag
ccgttgacgctgctggcaccgctcagcgcggtggtcggtgtgctggccgcgatggtgctg
tcggctcgccgcaagggcggcgcggccttcacggcaagctccgtcggggtagggggtgtg
gtcgccaccgcgggcatcagcatgttcccgttcatcgtgccgtcctcgcgcatgagcgag
gccagcctgacgctgtgggattccgtttccagcgagctgacgctctccatcgtcaccgtg
gcgggtctggtgatggtgccgaccatcatcctctacaccacctggtgctacgtgaagatg
tggcgacgtgtcaccgtcgcgcatatcgagcaggacggtcacagtctgtattga
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