Cobetia sp. D5: U0O11_06830
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Entry
U0O11_06830 CDS
T10202
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
cobd Cobetia sp. D5
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobd03009
]
U0O11_06830
Ribosome biogenesis [BR:
cobd03009
]
Prokaryotic type
ribosomal protein modification factors
U0O11_06830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
YjiS-like
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
WVS99879
LinkDB
All DBs
Position
1620235..1622427
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AA seq
730 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVITDQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCV
ARDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDLSDKDRQGILRSIERCTVKKVVQT
GPGFEIETVDNLDEDAQALLMAEPPEGQSTWIEGKDLPLEQTIANMTGLLNDLGMKIEIA
SWRNIVPHVWSLHIRDAASPMCFTNGKGSTKESALCSALGEFIERLSCNFFYNDQFFGEA
IADSEFVHYPNEKWFQPGPNDEIPEGVLDDYCLEIFNPDGELGGSNLIDTNSGRTDRGIV
SLPFTRRSDGETIYFPSNLIENLYLSNGMSAGNTLPEAQVQCLSEIFERAVKREILEQEL
TLPDVPQEVLAKYPEIVEGIEALEAQGFPILVKDASLGGQFPVACVTLMNPKTGGVFASF
GAHPSFEVAIERSLTELMQGRSFEGLNDFMPPTFNSLAVSEPNNFVEHFIDSSGLVSWRF
FSSKTDIEFVEWDFSGSNEEEVANLFGILDEIGKEAYMAVHEDLGAPVCRILVPGYSEVY
PVEDLVWDNTNMALDYREDILNLHRLDDEQLADLGERLEESQLDEHMDIKTLIGIEFDEN
TIWGQLTILELKLMINLALGQHEDALDRVEMFLQYNDNTVVRGLYYQAMKAVLEITLDDE
LELEDYLYNFRRMFGEDTMAAVVGSVQGEVRFHGLEPTNMQLEGLDRHLRLIESYQKLHA
HRAALAAKQG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaacctgaggctcgaggcgaaattcgacgacttc
acggtcatcaccgatcagcccatccgctacaagggtgatgggtcggcgccgagcccgttc
gactacttcctggcgtcgtcggcgctgtgcgcggcgtacttcgtgaaggtgtactgcgtg
gcgcgggacatcccgaccgagaacatccgtctgtcccagaacaacatcgtcgacccggag
aatcgctacaaccagatcttcaagatccaggtggagctgccggaagacctctccgacaag
gaccgccagggcatcctgcgttccatcgagcgttgcacggtgaagaaggtcgtccagacc
ggcccgggcttcgagatcgagacggtcgacaacctcgatgaggacgcccaggccttgctg
atggcggagccgccggaagggcagagcacctggatcgaaggcaaggacctgccgctggag
cagaccatcgccaacatgacgggcctgctgaatgatctcggcatgaagatcgagatcgcc
tcctggcgcaacatcgtgccgcacgtctggtcgctgcacattcgtgatgccgcctcaccg
atgtgcttcaccaacggcaagggctcgaccaaggagagcgcgctgtgctcggccctgggc
gagttcatcgagcgcctgagctgcaacttcttctacaacgaccagttcttcggcgaagcc
atcgctgacagcgagttcgtgcactacccgaacgagaagtggttccagccgggcccgaac
gacgagatcccggaaggcgtgctggatgactactgcctggagatcttcaatccggacggc
gagctgggtggctccaatctgatcgacaccaattccgggcgtacggatcgtggcatcgtg
tccctgccgttcactcgccgttcggacggtgagacgatctacttcccgtccaacctgatc
gagaacctgtatctcagcaacggcatgagcgccggcaatactctgccggaagcccaggtg
cagtgtctgtccgagatcttcgagcgtgccgtgaagcgcgagattctcgagcaggaactg
accctgccggacgtgccgcaggaggtgctggccaagtacccggaaatcgtcgaaggcatc
gaggcgctggaagcccagggcttcccgattctggtcaaggacgcctcgctgggcggtcag
ttcccagtggcctgcgtcacgctgatgaacccgaagaccggcggtgtcttcgcctccttc
ggcgcgcacccgagctttgaggtcgccatcgagcgcagcctgaccgagctgatgcagggc
cgcagcttcgaggggctcaacgacttcatgccgccgaccttcaactcgctggccgtgtcc
gagccgaacaacttcgtcgagcacttcatcgactcctcgggtctggtctcttggcgcttc
ttcagctccaagaccgacatcgagttcgtcgagtgggacttctccggcagcaatgaagaa
gaagtcgccaatctgttcggcatcctcgatgagatcggcaaggaggcctacatggcggtg
cacgaggatcttggcgcgccggtgtgccgtatcctggtgccgggctattccgaggtctat
ccggtcgaggacctggtgtgggacaacaccaacatggcgctggattaccgcgaggacatc
ctcaatctgcatcgtctcgatgacgagcagctggcggacctgggcgagcgtctcgaagag
agccagcttgatgagcacatggacatcaagacgctgatcggcatcgagttcgacgagaac
accatctggggtcagctgacgattctcgagctgaaactgatgatcaacctcgcgctgggt
cagcacgaggacgcgctggatcgtgtcgagatgttcctgcagtacaacgacaacaccgtc
gtgcgtggcctctattatcaggccatgaaggcggtgctggagatcacgctggatgacgag
ctggaactcgaggactacctctacaacttccgccgcatgttcggtgaagacaccatggct
gccgtggtgggctctgtgcagggcgaggtgcgcttccatggtctggaaccgaccaacatg
cagctggaagggctcgatcgccacctgcgcctgatcgaaagctaccagaaactgcacgcc
catcgtgctgccctggcggccaagcagggctga
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