Cobetia sp. D5: U0O11_07470
Help
Entry
U0O11_07470 CDS
T10202
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cobd Cobetia sp. D5
Pathway
cobd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0O11_07470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobd02000
]
U0O11_07470
Transporters [BR:
cobd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
U0O11_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVT00005
LinkDB
All DBs
Position
1763056..1764678
Genome browser
AA seq
540 aa
AA seq
DB search
MVKLLSRLRWQYRTFLHDRRQLAVASVALSLAVVQPSHAQDASAAQASAADTRRLEIVAP
FDIKGADPLLSGILFQRMQIVETLVEVDATGELQPGLATDWEVSDDGLEWRFTLRSGVQF
HDGSQLDAEVARQVLEIASAKPGLLKSVPVERIVAEDAQTLVIALSEPFAALPAYLADYR
QQILAPAAFDETGTAQQVIGTGPYRMLRMTPPLSLEVTAFEDYWGPQPEVRQARYQAVSR
AEGRALIAESGDADFTYGLDPASRQRLSQSPRVTLAAAATPRTMLLKVNANHPAFQDPAV
RRALSLAIDRTAIAQVVLRYPRGASQLFPPMVEGWHDPALPELHQDVAEARALLDAAGWT
VGEEGIRHKDGQRLAISLITFSDRPELPLVATVLERQFHAIGIQTRLDITNFSAIPAGHH
DGSLDMALFARNLAMVPDPIGNVLSDYAGTPEAPGGDWGAMGWFDADFTAELERMAREGY
GPTPAGQDPRAQASGVIQRALPVIPIAWYYQNLAISNRLQSAQVDPWERSFGLSELRWAQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaattgctctcaaggcttcggtggcaataccgaaccttccttcacgatcgcagg
cagctggccgtcgccagcgtcgcgctgagcctggccgtggtgcagcccagccatgcgcaa
gatgcctcagcggcgcaagcgtcggcggctgacacacgacgtctggagattgtcgcgccc
ttcgacattaagggggcggacccgctgctcagcggcattcttttccagcgcatgcagatc
gtcgagacactggtcgaggtggatgccacgggagagctgcagccgggattggcgaccgat
tgggaggtctcggatgacggcctggagtggcgcttcacgctccgctccggcgtacagttc
catgatggcagccagctggatgccgaggtggcgcgtcaggtgctcgagatcgcaagtgcc
aagccgggtctgttgaagtcggtgccggtcgagcggatcgtcgccgaagatgcccagacg
ctggtgattgccctcagcgagcccttcgccgcattgcccgcctatctggccgattatcgc
cagcagatactcgcgccggcagccttcgatgagacgggcaccgcccagcaggtcatcggc
accggcccctatcgcatgctgcgcatgacgccgcccttgagcctggaagtcaccgccttc
gaggactactggggcccgcagcccgaggtgcgccaggcgcgctatcaggcggtgagccgc
gccgagggcagggcattgatcgccgagagcggagatgccgacttcacctatgggctggac
cccgccagtcgccagcgtctctcccagtcgccgcgtgtgactctggcagcggccgcgacg
ccgcgcacgatgctgttgaaggtcaacgccaatcatccggcctttcaggaccccgctgta
cggcgtgcattgagtctggcgatcgatcgcaccgccatcgctcaggtcgtgctgcgctat
ccgcgtggcgccagccagctgttcccgccgatggtggaaggctggcatgaccccgcactg
cccgagctgcatcaggacgtcgccgaggcgcgtgcactgctggacgccgcaggttggacc
gtcggcgaggagggtatccgccacaaggatggccagcgcctcgcgatcagcctgatcacc
ttctcggaccgtccggagctgccgctggtcgccacggtgctggagcgccagttccacgcc
atcggcatccagacacgtctggatatcaccaacttctcggcgattccggccggccatcat
gacggcagcctcgacatggcgctgttcgcgcgcaatctggccatggtgccggaccccatc
ggcaacgtgctgagcgattacgcgggaacccccgaggcccctggtggcgactggggcgcg
atgggctggttcgatgcggacttcaccgccgagcttgagcgcatggcacgcgagggctat
gggcccacaccggcagggcaggacccgcgcgcccaggccagcggcgtgatccagcgggcg
ctgcccgtgatccccatcgcctggtactaccagaacctggcgatctccaatcgactgcaa
agcgctcaggtagatccctgggagcgtagtttcggcctttcagaattgcggtgggcacaa
tga
DBGET
integrated database retrieval system
