Cobetia sp. D5: U0O11_08420
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Entry
U0O11_08420 CDS
T10202
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
cobd Cobetia sp. D5
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobd02000
]
U0O11_08420
Transporters [BR:
cobd02000
]
Other transporters
Pores ion channels [TC:
1
]
U0O11_08420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WVT00186
LinkDB
All DBs
Position
2012751..2016923
Genome browser
AA seq
1390 aa
AA seq
DB search
MLELSNPYVRRGGLVIRLLIWLLVFLIGLTMLLVGGVLSPWGTGLVLDQARSRGFIDYSQ
ASGSPLEALSLKDVSLDLPGLAVNADSLSLAWGEDCLLKGKLCLESLESSGLAITLSDSG
ASTEPEPESGESLNVPIVVPIPIEVRKVAIDDFALALADGSRVTFDHFHTSAALSVSTLT
LGETRLITSRFIPADADAAQTASDAVSLEGVSITPEAQQAASAVVHTQVVTSQAESAAKA
ISNKTITDDAAEVSGKTAAETSDQTAQAGRIALPEVYIPLTIEVPDLAIEDFAIEGPSPY
EVSRLSLALKAEGHDITLSRLEVDSRDVNADLVAQVTLKDEYPLSATLNAETLIDPVRHE
KLRLSLEGSLADLEASLKADGPLAAELVASADVLDSDLPFEARLSSERITWPFAAVTDAS
DDTSADAQKGAQTATQAKDGKNTSGSAAAASFTPDYSVENLALVAKGSLSGYTTTLDAII
EGRDIPRATLSLAGDGDLEHYRWQPLKIALKRGSATTRGEIHWQQGIQVAAELALDKLHP
EDLLPAPAGGGQKAVRGELSGNLVASFHQPQQGPWAVDVSKLDIHGTLLERPLTLTGKLS
GNADMQWDVNALELRQGQNRLSANGKIAKTITLAANIDFPALSTLMPDIAGELKGKIDAS
GTLDKPQLASNFTARRLQIGENRISDMALSAGVDARKRGIDDPALDIALNADDVRAGGQQ
IATVALTLGGFLSDHTLQFDTEMAGEMPLSRLGLTLKGGLDKAREHYRGALSPLTANTDF
GDFNFDTPASFDANLAKGSVLVQPFCLSREQGGQICVAEPLSAGNDGQAVVTLEGIPLDM
AQSAMPESWTIGGATGGKITASWKQGGQRWNADAELAGKLTLAGEDADGNAWSLPETTLQ
LALEATPDKADLDTQIRLDSAGGIGLTVSVLDPAGAGQLDGSLAIRDIDLSPYRPLVAGM
TQLEGMLAGDVEVGGNLSLPSLTGPIALTGVKVQGEGLPVSLSDAQFSVDFDGNNADIDG
YLVGNDARWGIDGEAAWPTLEDWTASLNLDGAKNPLELHIAGIGRMRVAPDLEINASPTL
LKLRGDVKVPWTRIEVDQVPPSAVSPSSDTIIIERPSDEATSNPAELADGSDTAKALNEA
GMALDVRIGIHIGPDARLEAMGLKTKLRGDLDVRQSKGGVQVFGEVNLVDGTYKSFGQDL
QISKGQVLLAGPPSSPRLNIEAIRDPDNTEDDVTAGVRVTGLASSPSVEIFSDPSMDESS
ALSYLLRGEGLDSDTSSDSAVTSALIGMSLAQSGQVVGQIGETFGVRDLSLDSSGSGDDS
QVVVSGYIAPDLKLSYGVGLFSPIAELTLRYKLFRNLYAEAVSGTAQAVDLLYSFSLGRS
ELAPRVGKDR
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgtctaatccctatgtacgtcggggcggcctggtcatccggttgctgata
tggctgctcgtgttcctgatcgggctgacgatgctgctggtcgggggcgtgctgtctccg
tggggcaccggactggtgctcgatcaggcgcgctcgcgtggcttcatcgattactcccag
gcctccggctcaccgctggaagcgctgtcactcaaggacgtctcgctggacctgccgggg
ctggccgtcaatgccgactcgctgtcgctggcctggggcgaggactgcctgctcaagggc
aagctgtgtctcgagtcgctggagtccagtggcctcgcgatcaccctgagcgatagcggt
gccagcactgaaccggaaccggagagcggtgagagtctcaatgtgcccatcgtggtgccg
attcccatcgaggtgcgcaaggtcgccattgatgacttcgccctggcgctggcggatggc
agtcgcgtcaccttcgatcatttccatacctcggccgcgctgtcagtgagtacgctgacg
ctgggcgagacacgccttatcaccagtcgtttcattccggccgatgccgacgcggctcaa
acggcgtcagatgccgtcagtctcgagggtgtgagcatcacgcctgaggctcagcaagcg
gcaagtgcagtggtccacactcaggtcgtgacgtctcaagcagagagcgccgccaaggct
atctcgaataagaccatcacggatgacgccgcagaagtgtctggcaagactgccgctgaa
acctcggatcagacagcacaggccgggcgcatcgccttgccggaagtctatattccgctg
accatcgaggttcccgatctcgccatcgaagactttgcgatcgaggggccaagcccgtat
gaggtcagccgcctgtcgctggcactcaaggcggaagggcatgacatcacgctctcgcgt
ctcgaggtcgattcccgcgacgtcaacgccgatctcgtggcgcaggtcaccttgaaggac
gagtatcccctgagcgccacgctcaatgccgagaccctgattgatcccgtgcgtcatgaa
aagctgcgcctgtctctggaaggctcgctggcggatcttgaagcctctctcaaggccgac
ggcccacttgccgctgagcttgtggccagcgcggatgtactggacagcgatctgcccttc
gaggcgcgcctgagctccgagcggatcacctggccctttgccgctgtcactgatgcctct
gatgacacctccgcggatgcgcagaaaggcgctcagacagcgacccaagccaaggatggc
aagaacacgtctggctccgctgccgctgcctccttcacgcctgactatagcgtcgagaat
ctggcgctggtcgccaagggctcactgtcggggtatacgaccacgctggatgccatcatc
gaggggcgtgacattccgcgcgccaccttgtcattggcaggcgacggcgatctcgagcat
taccgctggcagccactcaagatcgcgctcaagcgcggctccgccaccacccgtggcgag
attcactggcagcaaggtattcaggtcgccgccgagctggccctcgacaagctgcatccc
gaagacttgctgccggccccggccggaggcggccagaaagccgtgcgtggtgagctgagc
ggcaatctcgtggccagcttccatcagccgcaacaaggtccgtgggccgtcgatgtcagc
aagctggatatccatggcaccttgctcgagcgtccgctcacgctgaccggcaagctttca
ggcaatgccgacatgcagtgggacgtcaacgcgctggagctgcgccagggccagaaccgt
ctgagcgccaatggcaagattgccaagaccatcaccctggcggccaacatcgatttcccg
gcgctatcgaccctgatgccggatatcgcgggtgagctcaagggcaagatcgatgcctcg
ggcactctcgacaagcctcagctggccagcaacttcaccgcacgacgcctgcagatcggt
gagaaccgtatctccgacatggcactgtcggccggggtcgatgcccgcaagcgggggatt
gatgacccggcactggatatcgccctcaatgccgatgatgtcagagctggcggacagcag
atcgcgaccgtcgcgctgacgctgggaggcttcctgagcgatcacaccctgcagttcgat
accgagatggccggtgagatgccgctttctcgtctggggctgaccctcaagggggggctc
gacaaggcgcgtgagcattatcgcggtgcgctgtctccgctgacggcgaataccgatttc
ggggacttcaacttcgacacaccggcgagcttcgatgccaatctcgccaagggcagcgtg
ctggtgcagccgttctgtctgagtcgcgaacagggcggccagatctgtgtcgccgaaccc
ttgagcgcgggcaatgacggtcaggccgtggtgactctcgaggggataccgctggacatg
gcccagagcgccatgccggagagttggaccatcggcggtgccacgggcggcaagatcacg
gcaagctggaagcagggtggccaacgctggaatgctgacgcggagctggcgggcaagttg
acgctggccggcgaagacgccgacggcaatgcctggtcactgccggagaccaccctgcaa
ctggcgctggaggccacgcccgacaaggctgatctcgatacccagattcgcctcgacagc
gctggcggcatcggtctcaccgtgtcggtcctcgacccggcgggcgcaggccagctggat
ggctcgctggccatccgcgacatcgacctctcgccgtatcgtccgctggtggcgggcatg
actcagctggaaggcatgctggcgggtgacgtcgaggtcggcggcaatctgagcctaccg
tcgttgaccggcccaatcgcgctgaccggtgtcaaggtgcagggcgaaggcctgccggtg
tcgctgtcggatgcccagttctccgttgacttcgatggcaacaatgccgatatcgatggc
tatctggtgggcaatgatgcgcgctggggcatcgatggcgaggcggcctggccgacgctt
gaggactggacggcgtcattgaacctcgacggcgcgaagaacccgctcgagctgcatatc
gccgggatcggccgcatgcgcgtcgcgccggatctcgagatcaatgccagccccacgctg
ctcaagctccggggtgacgtcaaggtgccgtggacacgcatcgaagtggaccaggtgccg
ccgtctgccgtgtcaccctccagtgacaccatcatcatcgagcgtcccagtgatgaggcc
acctccaacccggccgagcttgccgatggcagcgataccgccaaggcgctcaacgaggcc
ggcatggcgctggatgtgcgtatcggcatccatatcggaccggatgcgcgcttggaggca
atggggctcaagaccaagctcagaggcgatctcgatgtgcgtcagtccaagggcggcgtg
caggtcttcggtgaggtcaatctggtcgacggaacctacaagagcttcgggcaggacctg
cagatcagcaagggacaagtcttgctggccgggccgccctcgagcccgcgtctgaatatc
gaggcgatccgtgatcctgacaacaccgaggacgacgtgaccgcaggggtgcgtgtgacg
gggcttgcctcgtcacccagcgtcgagatcttctcggacccgtcgatggatgagtcctcg
gcactgagttatctgctgcgcggtgagggcctggacagcgacaccagcagtgacagtgcg
gtcacgtccgccttgatcggcatgtcattggcgcaaagtggccaggtggtcggccagatc
ggggaaaccttcggtgtgcgcgacctgagtctggacagctccggcagcggggatgacagc
caggtggtggtcagcggctatatcgctccggacctgaagctcagttacggcgtcgggctg
ttctcgccgatcgcggagctgacgctgcgctacaagctgttccgcaatctgtatgccgaa
gcggtgtccggcacggcgcaggccgtggatctgctctacagcttctcgctgggtcgcagc
gagctggcgcccagagtcggcaaggacagatga
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