Cobetia sp. D5: U0O11_08455
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Entry
U0O11_08455 CDS
T10202
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
cobd Cobetia sp. D5
Pathway
cobd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0O11_08455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobd02000
]
U0O11_08455
Transporters [BR:
cobd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
U0O11_08455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_16
SMC_N
AAA_22
AAA_29
AAA_21
Zeta_toxin
AAA_5
NACHT
PRK
AAA
Mg_chelatase
nSTAND1
Rad17
RNA_helicase
NPHP3_N
Sigma54_activat
RsgA_GTPase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WVT00328
LinkDB
All DBs
Position
complement(2024087..2025112)
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AA seq
341 aa
AA seq
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MDSAELGETLVEIRDLEKRFSLSGDFLEQLTFEKGRLRRKQEYVHAINGVTLDVKRGEAL
CVVGESGCGKSTVARTVMGLLKPSGGEVRFDGTRIDDMAPRDLLPYRRRMQMIFQNPYAS
LNPRMTIQQTLEEPLRFHQPTLKDGEVRDKIEEVMRSVGIDPDWGKRFAHEFSGGQRQRI
SIARALAVDPEFIVADEPISALDVSIQAQVLNLMMEAQEQRNLTYLFITHDLAVVEHFGT
RVAVMYLGTLCELADTRSLFARPRHPYTQALMSAIPRLHDDKPNHIRLEGEVPTPVNLPS
GCVFHGRCPHANQRCRTEIPRLIATDTGQVACHAVEEGRID
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgccgagcttggcgaaaccctggtagaaattcgtgatctcgagaagcgcttc
tcgttgtccggcgactttctcgaacagctgaccttcgagaagggacgcctgcgtcgcaaa
caggaatacgtgcacgccatcaatggcgtcacactggacgtcaaacgcggtgaggcgctg
tgcgtggtcggggaatccggctgcggcaagtcgacggtcgcgcggaccgtgatggggctg
ctcaagcccagcggtggcgaggtccgttttgacggcacccgcatcgatgacatggccccg
cgtgacctgctgccctaccgccgtcgcatgcagatgatcttccagaatccctatgcgtcg
ctgaatccgcgcatgaccatccagcagacgctggaggagccgctgcgcttccatcagccg
acgctcaaggatggcgaggtgcgcgacaagatcgaggaggtgatgcgctcggtgggcatc
gaccccgactggggcaagcgcttcgcccacgaattctccggcggccagcgtcagcgtatc
tcgatcgcccgcgcgctggcggtggacccggaattcatcgtcgccgatgagccgatctcg
gcgctggacgtgtcgatccaggcgcaggtgctcaacctgatgatggaggcgcaggagcaa
cgcaacctgacgtatctgttcatcacccacgacctggccgtggtcgagcacttcggcacc
cgcgtcgcggtgatgtatctgggcacgctgtgcgagctggcggacacccgttcactgttc
gcccgcccgcgtcacccctacacccaggcattgatgtcggcgatcccgcgtctgcacgat
gacaaacccaatcacattcgcctcgagggtgaggtgccgacgccggtcaatctgccttcg
ggctgcgtcttccatggccgttgtccgcatgccaatcagcgttgccgcacggagattccg
cgcctgatcgccacggacaccggtcaggtcgcctgccacgccgtggaagaaggccgcatc
gactga
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