KEGG   Cobetia sp. D5: U0O11_13120
Entry
U0O11_13120       CDS       T10202                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
cobd  Cobetia sp. D5
Pathway
cobd00260  Glycine, serine and threonine metabolism
cobd00460  Cyanoamino acid metabolism
cobd00630  Glyoxylate and dicarboxylate metabolism
cobd00670  One carbon pool by folate
cobd00680  Methane metabolism
cobd01100  Metabolic pathways
cobd01110  Biosynthesis of secondary metabolites
cobd01120  Microbial metabolism in diverse environments
cobd01200  Carbon metabolism
cobd01230  Biosynthesis of amino acids
cobd01240  Biosynthesis of cofactors
cobd04981  Folate transport and metabolism
Module
cobd_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:cobd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    U0O11_13120 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    U0O11_13120 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    U0O11_13120 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    U0O11_13120 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    U0O11_13120 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    U0O11_13120 (glyA)
Enzymes [BR:cobd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     U0O11_13120 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DUF3863
Other DBs
NCBI-ProteinID: WVS97809
LinkDB
Position
complement(3142869..3144131)
AA seq 420 aa
MFTRDMQIAGFDDALLSAMDDEVVRQEAHIELIASENYASPRVIQAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVEQLAIDRACELFGATYANVQPHAGSQANSAVFQALVSPGDTILGMS
LDAGGHLTHGARPNFSGKHYNAVQYGLGENGLIDYAEVARLAREHKPKMIIAGFSAYSQI
IDWAEFRKIADEVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGLIL
SAEGNADIEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEAMDPAFTTYQKQVVKNAKAMAS
VFLERGFEVVSGGTEDHLFLLSLVKQGLTGKDADAALGRAHITVNKNAVPGDPQSPFVTS
GLRIGTPAVTTRGFQEQECLELAGWICDILDAMVAGDSAAAEAEVQAKVSAVCARLPVYA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgttcacccgtgacatgcagattgccggttttgatgatgcgctcctgagcgccatggac
gacgaagtcgttcgccaggaagctcacatcgagctgatcgcctccgagaactacgccagc
ccccgcgtcatccaggcgcaaggctcccagctgaccaacaagtacgcggaaggctacccg
ggcaagcgttactacggcggttgcgagttcgtcgacaaggtcgagcagctggccatcgat
cgtgcctgcgaactgttcggtgccacctacgccaacgttcagccgcacgccggttcccag
gccaacagtgccgtcttccaggcgctggtctcgccgggtgacaccattctgggcatgagc
ctggacgcggggggtcacctgactcacggtgcacgtccgaacttctccggcaagcactac
aacgccgtgcagtacggtctgggcgagaacggcctgatcgactacgccgaagtcgcgcgt
ctggcgcgtgagcacaagccgaagatgatcatcgccggcttctccgcttactcccagatc
atcgactgggccgagttccgcaagatcgccgacgaagtgggtgcctacctgctggtcgat
atggcccacgtggccggtctggtcgccgctggcgtctacccgagcccgctgccccacgcc
cacgtcgtcaccaccaccacgcacaagaccctgcgcggtccgcgtggcggcctgatcctg
tccgccgaaggcaatgccgacatcgagaagaagctgaactccgctgtcttcccgggcggc
cagggtggtccgctgatgcacgtcatcgcggccaaggcggtctgcttcaaggaagcgatg
gacccggccttcaccacttaccagaagcaagtggtcaagaacgccaaggcgatggcgtcc
gtgttcctggagcgcggcttcgaagtcgtctccggcggcaccgaagaccacctgttcctg
ctgtctctggtcaagcagggcctgaccggcaaggacgctgacgctgcgctgggccgtgcc
cacatcaccgtcaacaagaacgccgtaccgggtgacccgcagtcgccgttcgtcacctcc
ggtctgcgtatcggtaccccggccgtcaccacgcgtggcttccaggagcaggagtgtttg
gaactggccggctggatctgcgatatcctcgatgcgatggtcgccggcgattccgccgct
gccgaagccgaggtgcaggccaaggtctccgccgtctgtgcacgtctgccggtctacgcc
tga

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