Cobetia sp. D5: U0O11_15565
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Entry
U0O11_15565 CDS
T10202
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cobd Cobetia sp. D5
Pathway
cobd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U0O11_15565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobd03400
]
U0O11_15565
Enzymes [BR:
cobd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0O11_15565
DNA repair and recombination proteins [BR:
cobd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U0O11_15565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
HypA
AAA_30
TrwB_AAD_bind
Zn_ribbon_6
WHD_PriA
Motif
Other DBs
NCBI-ProteinID:
WVS98248
LinkDB
All DBs
Position
3764571..3766829
Genome browser
AA seq
752 aa
AA seq
DB search
MPDTTDKTATHLPGRVLGIAIPGPLRDLFDYLPSRQPPRHGWQVGLRVRVEFGRRQLVGV
IAELRSDSSFPIDKLKPVSEVIDDEPLPADWLWICQFTARYYQHSLGDTFAQAMPSLLRQ
GRALEARTRERWTLTDKGRATEPASLGRATRQIALLELLAQHRHGLVHSAITAQGFTRQQ
LETLRGRGYIESREEPVTGATPEQANKGVLAEPGLALNDEQGRALSRLHEGLNRFSPTLL
EGVTGSGKTEVYLQLIEAVLDRGGQALVLVPEIGLTPQTLERFRRRFRVPQVMLHSGVSD
GERLDGFEAARSGRARIVIGTRSAIFTPMARLGVIIVDEEHDGSFKQQDGLRYHARDLAL
VRGKQEGIPVVLGSATPSLESLRHAREGRFTHLHLHQRAGRSQPARLHPVDLRGRMTLGG
LSTQSLEAIEKRLAQGDQVLVFINRRGFAPTLTCHACGWIAECDNCDARMTLHRHPPQLT
CHHCERTRPLPDACPACGSGDVRPQGAGTERTEELLGEKFPDVPVLRIDRDSTQRKDAMS
EALAVIRRGEPCLLVGTQMLAKGHHFPHVTLVVVVNADSGLYAADFRALEQSAQLLVQVA
GRAGRAERPGEVLIQTRHPEDPNLLTLIQAGYPQLAGELLEERRIAQLPPFSHLALLRAE
ASDQQQVEQWLLKVGGALRQHLEAANLKVDCLGPVPAPMERRQNRYHAQLLLRCAKRGPL
HEAAAWLVTLCEQDRDARRLRWSLDVDPIGMA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgacactaccgacaagactgcgactcacctgccgggacgtgtgctgggcatcgcg
attcccggcccgctgcgcgatctgttcgactacctgccatcccgccagccgcctcgtcac
ggctggcaggtgggtctgcgcgtgcgcgtcgaattcgggcgtcgccagctggtcggggtg
atcgccgagctgcgcagcgactcaagcttccccatcgacaagctcaagcctgtcagcgaa
gtcatcgatgacgaaccgctgccggccgactggttgtggatatgtcagtttaccgcgcgc
tattaccagcactcgctcggcgacaccttcgcccaggcgatgccctcgctgctgcgtcag
gggcgcgccctggaggcgcgtacccgagagcgctggacgctgaccgacaagggccgcgcc
accgagccggcaagcctggggcgagccacccgccagatcgcgttgctggagctgctcgct
cagcatcgtcatggtctggtgcacagcgccatcaccgcccagggcttcacccgccagcag
ctggagaccctgcgcggccgcggctatatcgaatcccgtgaggagccggtgaccggcgcc
acgccggagcaggccaacaaaggcgtgctcgccgaacccggcctggccctcaatgatgag
cagggtcgcgccctctcgcgtctgcatgagggcctgaaccgcttctcgcccacactgctg
gagggcgtgaccggttccggcaagaccgaggtctatctgcaattgatcgaggcggtgctg
gaccgcggtggccaggcgctggtgctggtgcccgagatcggcctgacgccccagacgctg
gagcgcttccgcagacgcttccgcgtgccgcaggtgatgctgcactccggcgtcagcgat
ggtgaacgcctcgatggcttcgaagccgcccgcagcggtcgcgcgcgcatcgtgatcggt
acccgctccgccatcttcacgccgatggccagactcggcgtgatcatcgtcgacgaggag
cacgacggctccttcaagcaacaggacggcctgcgctatcacgcccgcgatctggcgctg
gtgcgcggcaagcaggaaggcatacccgtggtgctcggcagcgccacgccgtcccttgag
agcctgcgccatgctcgcgagggccgcttcacgcatctgcacctgcatcagcgcgccggt
cgcagccagccggcgcgcctgcacccggtcgacctgcgcggccgcatgacgctgggcggt
ctctcgacccagagcctggaggcgatcgagaagcgcctcgcccagggcgatcaggtgctg
gtgttcatcaatcggcgcggcttcgcgccgaccctgacctgccatgcctgcggctggatc
gccgaatgcgacaactgcgatgcccgcatgaccctgcatcgtcatccgccccagctgacc
tgccaccactgcgagcgtacccgcccgctgccggatgcctgcccggcctgtggcagcgga
gatgttcgcccgcagggcgcgggcaccgagcgcaccgaagagctgctcggcgagaaattc
cccgacgtgccggtgctgcgcatagaccgcgacagcacccagcgcaaggacgccatgagc
gaggcgctggcggtgatccggcgtggcgaaccctgcctgctggtcggcacccagatgctg
gccaagggccaccacttcccccacgtcaccctggtggtggtggtcaacgccgacagcggc
ctctatgccgccgacttccgggcgctggagcagtccgcgcagctgctggtgcaggtcgcg
gggcgtgccggacgcgccgagcgccccggtgaggtgttgatccagacccgccacccggaa
gaccccaacctgctgacgctgattcaggccggctacccgcagctggcgggggaattgctc
gaggagcgccgtatcgcccagctgccgccgttcagccatctggcgctgctgcgcgccgag
gccagcgaccagcagcaggtcgaacagtggctgttgaaggtcggtggcgccctgcgccag
cacctcgaggctgccaatctcaaggtggattgcctcggcccggtgcccgcaccgatggag
cgtcgccagaatcgctatcacgcccaattgctgttgcgctgtgcgaaacgcggcccattg
catgaagcggcggcctggctggtgacgctctgcgagcaggaccgcgacgcgcgccgcctg
cgctggtcgctggatgtcgatcccatcggcatggcctga
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