Cobetia sp. D5: U0O11_15935
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Entry
U0O11_15935 CDS
T10202
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cobd Cobetia sp. D5
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobd03021
]
U0O11_15935 (rpoH)
Transcription machinery [BR:
cobd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U0O11_15935 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WVS98318
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Position
complement(3853278..3854153)
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AA seq
291 aa
AA seq
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MSTSLQPLGHLSPGQDLNGYIQSVNRIAVLTAEEEHELALRLHEENHLESARRLVMSHLR
FVVHIARSYSGYGLQQADLIQEGNVGLMKAVKRFDPHQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKVATTKAQRKLFFNLRGAKKRLAWLNNDEVDAIAGDLDVKPAVVREMESRLSAHD
AGFDAGPSDDESSAYQAPANYLEDHSLDPAAQVEQQDLEDDSHGRLLKALAALDERSRDI
LQQRWLSDNKSTLHELADIYGVSAERIRQLEKNAMKKLRESMGDMSEGFAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagtcttcagccacttggccacctgtcaccgggtcaagatctaaacggctat
attcagtcggtgaaccgtatcgctgtgcttactgccgaagaagagcatgagctggccctg
cggttgcatgaagagaatcatctggagtcggcccgtcgactcgtcatgtcgcacctgcgc
ttcgtcgtgcatatcgcgcgcagttacagcggctatggcttgcagcaggcggacctgatc
caggaaggtaacgtcggcctgatgaaggcggtcaagcgtttcgacccgcatcagggcgta
cgcctcgtctcctttgccgtgcattggatcaaggccgagatccacgagttcgtgctgcgt
aactggcgcatcgtgaaggtcgcgaccaccaaggctcagcgcaagctgttcttcaacctg
cgtggcgccaagaagcgtcttgcctggttgaacaacgatgaagtggatgccatcgcgggc
gatctggacgtcaaacctgccgtggtgcgtgagatggaaagccgtctctccgcccacgat
gcaggcttcgacgccggccccagcgacgacgagagctctgcctatcaggcgccggccaac
tatctggaagatcacagcctcgatccggctgcccaggtggagcagcaggacctggaagac
gactcccacggtcgtctgctcaaggcgctggcggcactcgatgagcgttcacgcgacatc
ctccagcagcgctggctgagcgacaacaagtcgactctgcacgagcttgccgacatctat
ggcgtctctgccgagcgtatccgtcagctcgagaagaacgcgatgaagaagctgcgtgaa
tcgatgggtgacatgagcgaaggcttcgctgcctga
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