Cobetia sp. D5: U0O11_16425
Help
Entry
U0O11_16425 CDS
T10202
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
cobd Cobetia sp. D5
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cobd02044
]
U0O11_16425
02035 Bacterial motility proteins [BR:
cobd02035
]
U0O11_16425
Secretion system [BR:
cobd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
U0O11_16425
Bacterial motility proteins [BR:
cobd02035
]
Pilus system
Pilus assembly proteins
U0O11_16425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
PQQ_3
VWA_2
Motif
Other DBs
NCBI-ProteinID:
WVS98400
LinkDB
All DBs
Position
complement(3967293..3970871)
Genome browser
AA seq
1192 aa
AA seq
DB search
MRYLLSGALCLVALPCLAAPGEIARAPVTEATGVQPNILFILDDSGSMAWEDTLNKGVEH
WGYQPASSVLGNSGVYSINAGVVSHRTQNTIARAIGSCNGFNVLAYDPELTYTPWAGKDR
FGVEYADATLLTARSNPYEPTSTVNLTGVYYMPWTDNDGDGEYDFEECGLYQSGSSLYVD
NTRQTYINQQSAAQKTNFANWFTYYRDRMSVAKSAMAGVIDANESRVGLRTIQGRNNRNV
ADMTDVDEREDLLEELFTAYPSGGTPLRTALKNAGEYYSSTGSNAPILSADEGGMCQQNY
SIMMSDGYWNGSSPSVGNVDGGSGDHISASHRDSHSNTLGDVAMKYYREDLRTDLIDSVP
TIPGVDENSAQHMVTYTVAFGVDGSLSENPADLESAFTWPQPSANTNTTIDDLRHAAWNG
RGEYLSAANPQALIDALNNIAQSIAGRAASTGSLDISSGGQTSGAYVIQTIYDPADWSGD
VVARKIGTNGALSATSDWSVAEWLRDDDSRSSSRKVITYNPGISEVDEKAFFFNIEEAGS
LEAEQVLDLVGFLDETLLSETLLATLRRTVRDDDDDDDDDDDDDGILGGVGSVVGGVTSG
VTQLTGRVLDTTGTFLKLDGANLGVRTSDLENLIGYLKGDDAYEGTLFRERDDNYLGDIV
HASPAIVGPPSASYRNDMEVSSYRSFKTLYEERQNMIYIGANDGMLHAIDMETGEEKFAY
MPYAAFSIESGRGIRQLADQNYVHQYYVDATPVARDVHVQLGDEDAPGWHSVLLGGLGAG
GKAVYMLDITDPEGFESLGESDGTSPAEIVQWEFTHEDLGYTFSDIQVARLDDGKWYAIF
GNGYNADSDGRAKLFIVDLEDPDNYALLDSQQGSNAGGSCTSGSSDCNGMSSPELADVDA
DGITDWVYAGDLHGNVWVFDMREFSLSNIGSSEMSRLFQSCAVALNSTSSICPAASRQPI
TSRVAVARSGVFNSTVDTPYLNVYWGTGQLLTLQDAVDTSTQSFYSVLHTGSSTRRHHGQ
LEKQSFSNISGVSDARTVTGVGVDYSNQNNNGMQYGWYLELPDSGERLVTIPAVRGDLIV
FNTTIPGSNGPCTGGASGWLNALSLRNGLQPVRSYNNVQQVFDYNADGEVNASDNVNNQV
VLSIKTEGEPTSPKFLGDTQYVGQGGTNQVVEMAMDFGIDGLEGRSAWYQLR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatctgctgagtggtgccttgtgccttgtcgccttgccctgtctggcggccccc
ggggaaatcgcccgcgccccggtcacggaagcgaccggggttcagcccaatatcctgttc
attctggatgattcgggcagcatggcctgggaagacactctcaacaagggggtggaacac
tgggggtatcagccagcgtcctcggtgcttgggaactccggggtctactcgatcaatgcc
ggggtcgtcagccatcgcacccagaacaccatcgctcgggccatcggctcgtgcaatggt
ttcaatgtgctggcctacgatccggagctgacctacaccccttgggcgggcaaggaccgc
tttggggtggagtacgcagatgccacgttgttgacggcgcgttcaaatccttatgagccg
acgtccaccgtcaacctcaccggggtctactacatgccctggacggataatgatggtgat
ggagagtatgacttcgaggagtgtggcctctatcaaagcggcagcagcctctatgtggac
aacacacgtcagacctacatcaaccagcagtccgccgcgcagaagaccaacttcgccaac
tggttcacgtattaccgtgaccgcatgtccgtggccaaatccgccatggccggcgtgatc
gacgccaacgagtcccgggtcgggctacgtaccatccagggtcgcaacaatcgcaacgtt
gcggacatgacggatgtcgatgagcgtgaagacctgctggaggagctgtttaccgcctat
ccctccggtggcacccctctgcgtaccgcgctcaagaatgccggtgagtattattccagc
actggaagcaatgctcccatcctgagtgcggatgagggcggcatgtgccagcagaactat
tccatcatgatgagcgatggctactggaatggctccagccccagtgtcggcaacgtcgat
ggtggcagcggtgatcacatcagtgccagtcaccgtgacagccattccaatacgcttggc
gatgtcgcgatgaaatattatcgcgaggacctgcggactgacttgatcgacagcgtgcct
accataccgggagtggatgaaaactccgctcagcacatggtgacctacaccgtcgctttc
ggtgtggatggctcgctgtccgagaaccctgctgatctcgagtctgccttcacctggccg
cagccttccgccaataccaataccaccatcgatgatctgcgccatgcggcctggaacgga
cgtggtgaatatctcagcgccgccaatccgcaggcattgattgatgcgctgaacaatatc
gcgcagtccatcgcagggcgcgcggccagcaccggtagcctggacatcagcagtggtggg
cagaccagcggcgcttatgtgatccagaccatctatgatcccgccgattggtcgggcgat
gtcgttgcacgcaagatcggcaccaatggcgccttgagcgccacctcggactggtccgtc
gcggagtggttgcgtgacgatgatagccgtagctccagccgcaaggtgatcacctacaac
ccggggatctccgaagtggatgaaaaggcgttcttcttcaatatcgaggaggccggatca
ctggaggccgaacaggtactggacctcgtgggcttcctcgatgagaccctgctgtcagaa
acactgctggcaacgctgcggagaaccgtccgggatgatgacgacgacgacgacgacgac
gacgatgatgatggcattcttggcggagtcggctcagtggtcggaggcgtcaccagtggc
gtgactcagctgacgggacgcgtcctggatactaccggtaccttcctgaagctggatggc
gctaaccttggtgtcagaacgtcggatctcgagaatctgatcggctacctcaagggtgat
gatgcctacgaaggcaccttgttccgcgagcgtgacgacaactatctcggagatatcgtg
catgcctcgccggcgatcgtcgggccgccttcggccagctatcgcaatgacatggaagtg
tcttcgtaccgctccttcaagacgctgtatgaggagcgccagaacatgatctacatcggt
gccaacgacggcatgctgcacgccatcgacatggagaccggtgaagagaagttcgcctac
atgccgtatgccgccttcagcatcgagagcgggcgcggtattcgccagctcgctgatcag
aactatgtgcaccagtactatgtcgatgccactccggtcgcgcgtgacgtgcatgtccag
ttgggggatgaggatgcgcccggttggcactcggtcctgctgggtgggctgggcgctggc
ggcaaggcggtctacatgctggatatcaccgatcctgaaggcttcgagtcattgggtgaa
tccgacggcacctcgccggccgagatcgtgcagtgggaattcacgcacgaggacctcggc
tataccttcagcgatattcaggtagcgcgtctggatgacggcaagtggtatgccatcttc
ggcaatggctacaacgccgacagcgatgggcgtgccaagttgttcatcgtggacctggaa
gaccccgacaactatgcgctgctggattctcaacagggcagtaatgccggtgggtcgtgc
acctctggcagcagtgactgcaatggcatgtcgagccctgagctggccgacgtcgatgcc
gatggcatcaccgactgggtctatgccggcgacctgcatggcaatgtctgggtgttcgac
atgcgcgagttctcgctgagcaacatcggcagcagcgaaatgtcgcgtctgttccagtca
tgtgccgttgccttgaacagcacgtcatcgatctgcccagctgcttcccgtcagcccatc
acatcgcgggtagccgtggcacgcagcggtgtcttcaacagcaccgtcgatacgccgtac
ctgaatgtgtactggggcaccgggcaattgctgacgctgcaggatgcggtcgatacctcg
acgcaatccttctacagcgtgctgcataccgggtcttcgactcgccgtcatcatggccag
ctggaaaagcagagcttctccaatatcagtggcgtgagtgacgcgcgaacggtcacgggg
gtaggcgtcgattattccaatcagaacaacaatggtatgcagtatggctggtacctggag
ctaccggactccggtgagcgtctggtgaccatcccggctgtccgtggtgatctgattgtc
ttcaataccaccatcccgggctccaatggcccctgtactggcggtgccagtggttggctg
aatgcgctcagcttgcgcaacggcctgcagccggtacgcagttacaacaatgtgcagcag
gtctttgattacaacgctgatggcgaggtcaacgcgagcgacaacgtcaacaatcaggtc
gtactctcgatcaagacagaaggcgagcccacctcaccgaaattcctgggcgatacccag
tatgtcggtcagggtggcaccaatcaggtggtcgaaatggccatggacttcgggatcgat
gggctggaaggccgtagtgcctggtatcagctgcgctag
DBGET
integrated database retrieval system
