Cobetia sp. D5: U0O11_17345
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Entry
U0O11_17345 CDS
T10202
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cobd Cobetia sp. D5
Pathway
cobd03420
Nucleotide excision repair
cobd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U0O11_17345 (uvrD)
03430 Mismatch repair
U0O11_17345 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobd03400
]
U0O11_17345 (uvrD)
Enzymes [BR:
cobd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0O11_17345 (uvrD)
DNA repair and recombination proteins [BR:
cobd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0O11_17345 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
U0O11_17345 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
WVS98569
LinkDB
All DBs
Position
complement(4175200..4177422)
Genome browser
AA seq
740 aa
AA seq
DB search
MSESPLLDHLNTHQREAVSAPPGNMLVLAGAGSGKTRVLVHRIAWLMDQYQFSPYAILSV
TFTNKASREMRTRLEALNGSSLRHMWVGTFHSISHRLLRTHWQEARLPEHFQIIDSDDQL
RMVKRLLKEHNVDDERWPPKQVQYFIAGCKEEGLRAHQVQTHGDAYMGKMVEMYELYQLA
CERGGLVDFGELLLRSLELLRDTPHLLAHYRERFAHLLVDEFQDTNTLQYAWLKLLAGDR
ECMTVVGDDDQSIYGWRGARVENIQRFTEEFANTRVVRLEQNYRSSSAILEAANALISHN
GGRMGKELWTDSGRGERIRVYAGFNDIDESRYIADTIRELVNEHGYSRDEIAILYRSNAQ
SRVLEETLIRQGMPYRIYGGQRFYERLEIKNALAYLRLMNNREDDAALERVINVPARGIG
MRTVEQLRERARYGNLTMWQAMSDAVSDGALKGRAATAVRAFADIIDGLDNDTAGMALHE
LVEHVIHVSGLREHHAAEKGEKGQARLENLSELVNACRAFSQGERMDPEAPSEGAEALEP
FLAEAALDAGDHEAAEGEECVQMMTLHSAKGLEFPVVFVAGVEEGLFPHKMSLEEPGRLE
EERRLCYVGVTRAMQRLYLTYAELRRMHGKETFQRPSRFLRELPEELMEEVRLRGQVSRP
VSTQRATPNRRPSGPRQESVEANGDMPALSLGSLVRHPLFGEGVVINAEGQGERARVQIS
FEGEGDKWLVLGFAKLEVLS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatcgcccctcctcgatcacctcaacacgcatcagcgtgaggccgtgtccgcg
ccgccgggcaacatgctggtactggcgggggccggttccggcaagacccgcgtgctggtt
caccgcatcgcctggttgatggaccaataccagttctcgccctacgccatcctgtcggtg
accttcaccaacaaggcctcgcgagagatgcgcacgcgtctcgaggcgctcaatggcagc
agcctgcgccacatgtgggtcggcaccttccactccatcagtcaccgtctgctgcgcacc
cactggcaggaggcgcgcctgcccgagcacttccagatcatcgacagcgatgaccagctg
cgcatggtcaagcggctgctcaaggagcacaacgtcgatgacgagcgctggccgcccaag
caggtccagtacttcatcgccggctgcaaggaggaaggtctgcgcgcccatcaggtgcag
acccacggcgatgcctacatgggcaagatggtcgagatgtatgagctctatcagctcgcc
tgtgaacgcggcggcctggtcgatttcggtgagctgctgctgcgctcgctggagctgctg
cgcgatacgccgcatctgctggcgcattaccgcgagcgcttcgcccacctgctggtcgac
gagttccaggataccaacaccctgcagtacgcctggctgaagctgttggccggtgatcgc
gagtgcatgaccgtggtcggcgatgatgaccagtccatctacggctggcgtggcgcgcgg
gtcgagaacatccagcgcttcaccgaggaattcgccaacacccgcgtggtgcgtctggag
cagaactatcgctcctccagcgccattctggaggccgccaacgccctgatcagccacaac
ggcgggcgcatgggcaaggagctgtggaccgacagcggtcgcggcgagcgcattcgtgtc
tatgccggcttcaatgacatcgatgagtcgcgctacatcgccgataccatccgtgaactg
gtcaatgagcatggctacagccgcgacgagatcgcgatcctgtatcgctccaacgcccag
tcacgcgtgctggaggagacgctgatccgccagggcatgccgtatcgcatctatggcggc
cagcgcttctacgagcgtctcgagatcaagaacgcgctcgcctatctgcgtctgatgaac
aaccgcgaggacgatgccgccctggagcgcgtgatcaacgtgccggcgcgtggcatcggc
atgcgcaccgtcgagcagctgcgcgagcgcgcacgctacggcaacctgaccatgtggcag
gcgatgagcgatgcggtctccgatggcgccctcaagggacgcgccgccaccgccgtgcga
gccttcgccgacatcatcgatggcctcgacaacgacaccgccggcatggcgctgcatgag
ctggtcgagcacgtcatccacgtctccggcctgcgtgagcatcacgccgcggagaagggc
gagaagggccaggcgcgcctcgagaacctctcggagctggtcaacgcctgccgcgccttc
agtcaaggcgagcgcatggacccggaagcccccagcgaaggggccgaggcgctggagcct
ttcctcgccgaagccgcgctggatgccggcgatcacgaagccgccgaaggcgaggaatgc
gtgcagatgatgacgctgcactctgccaaggggctcgaattcccggtggtattcgtcgcc
ggggtcgaggaggggttgttcccgcacaagatgtcgctggaagagccggggcgtctcgag
gaagagcgtcgcctgtgctacgtcggtgtcacccgcgccatgcagcgcctctacctgacc
tacgccgagctgcgtcgcatgcacggcaaggagaccttccagcggccgtcgcgcttcctg
cgtgaattgccggaagagctgatggaagaggtgcgtctgcgtggccaggtctcgcgtccg
gtctcgacccagcgcgccacgccgaatcgccgtccttccggtccgcgtcaggagagtgtc
gaggccaatggcgacatgccggcactctcgctcggtagcctggtgcgccatccgctgttc
ggggaaggcgtggtcatcaatgccgaaggccagggcgagcgcgcgcgcgtgcagatcagc
ttcgagggcgaaggcgacaagtggctggtgctgggctttgccaagctggaagtgctgagc
tga
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