Cobetia sp. D5: U0O11_17575
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Entry
U0O11_17575 CDS
T10202
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cobd Cobetia sp. D5
Pathway
cobd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0O11_17575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobd02000
]
U0O11_17575
Transporters [BR:
cobd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
U0O11_17575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_21
AAA_16
Dynamin_N
T2SSE
AAA_23
AAA_18
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
WVS98613
LinkDB
All DBs
Position
complement(4225305..4227122)
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AA seq
605 aa
AA seq
DB search
MSHDAATRPDTLSGTRLLSRRRLALLWQPLGGRRAEVLRALLILIAATVLDVLGPWLTQR
YLDDYLIPGNLAPEALAGLVAIYVITQLGAAAGRYFQQLRFARLALASVRDIRERVFTHL
LNQPLSTLDNIAAGELVARVTNDTESLKELYIGVLATLIGNVVLLIGILSAMALMDGTLA
MIATALVPLSIGMIWLYQRFSGRAAREVRRLRALQNARIAESIGGMSVLQASDQTERFSR
RYHHLNVSQYQARMRTVRVSGLLLRSAIDLMAMLITLSLVAVFGLRELGGGAELGVLYAF
IAWLGRISEPLIQITQRLQVFQSALVATGRLEEVLDRPRETPEPDTRAARKATRGHPDNA
VIASGHYQLEQLGFHHQGAEGSALNGLTLAIESGEFLGVVGPTGSGKSTLLDLLSGQRPA
PASQLLLDGRPLMEWSAQQRATAIAVVPQEPFIRATTLRDNLLLGREISQQHLSRILHKA
HLAPLVDSLPLGLDTLLGERGLSLSTGERQLLALGRALVTTPRVLLLDEATASIDSHTEA
LLQQALHELRGEVTLIVVAHRLATVRDADRLLVLEQGRITQLGSHDALMAEPGLYRRLWR
EDIAH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgatgccgcgacacgacccgacaccctcagcggcactcgcctgctcagccga
cggcgactggcattgctctggcaaccgctgggcgggcgccgcgcagaggtcctgcgcgca
ctgttgatccttatcgcggcgaccgtactggatgtgctcggcccgtggctgacccagcgc
tatctggatgactacctgattcccggcaacctcgcccccgaggccctggcaggcttggtg
gccatctacgtgatcacccagctgggcgccgccgccggacgctatttccagcagctgcgt
tttgcccgcctggccctcgccagcgtgcgcgatatccgtgagcgagtcttcacacacctg
cttaaccagccactatcgaccctcgacaatatcgccgccggtgaattggtggcccgcgtg
accaacgacaccgagtcgctcaaggagctgtatatcggggtgctggcgacactgatcggc
aatgtggtgctgttgatcggcatcctgtcggcgatggccctgatggatggcaccctggcg
atgatcgcgacggcgctggtcccgctctccatcggcatgatctggctgtatcagcgcttc
tccgggcgcgctgcacgcgaggtgcgccgcctgcgtgccttgcagaatgccagaatcgcc
gagtcgatcggcggcatgagtgtgctgcaggcaagcgaccagaccgaacgcttcagtcgg
cgctatcaccacctcaacgtctcccagtatcaggcgcgcatgcgcacggtgcgtgtgtcg
gggctgctgttgcgctcggccatcgacctgatggcgatgctgatcacgctctcgctggtc
gcagtgttcgggctgcgcgaactggggggcggtgcggaactgggggtgctctacgcgttc
atcgcctggttggggcgcatcagcgagcccctgatccagatcacgcagcgactgcaggtc
ttccagtcggcgctggtggcgacaggccggctggaagaggtgctggaccggccacgcgag
acgcctgagccagacacgcgcgccgcgaggaaagccacgcgtgggcacccggacaatgcc
gtgatagcgagtggtcactatcagctcgagcagttgggtttccaccatcagggtgcggag
ggttcggccctcaatggactgacgcttgccatcgagagcggtgagtttctcggcgtggtc
ggcccgacgggcagcggcaagtccaccctgctcgatctgctcagcgggcagcgccctgcc
ccggcgtctcagctgctgctggatggtcgtccgctgatggagtggtcggctcaacaacgc
gctaccgcgatagccgtcgtcccgcaggagcccttcatccgcgccacgacactgcgcgac
aacctgctgctggggcgtgagatcagccagcagcacctgtcacggatcctgcacaaagcg
catctggcgccgctggtcgatagtctgccgctggggctcgacaccttgctgggcgagcgc
ggcctcagtctctccacgggagagcgccaattgctggcgctcggacgcgcactggtcacg
acgccacgcgtgctgttgctggatgaggccaccgccagcatcgatagccataccgaagcc
ctgttgcagcaggcgctgcatgaattgcgcggggaagtgaccttgatcgtggtggcacac
cggctggccacggtgcgcgatgcggaccgcctgctggtgctggaacagggccgcatcacc
cagctggggagccatgatgccctgatggcagaacccggcctctatcggcggttatggcga
gaagacatcgcgcactga
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