Cobetia sp. D5: U0O11_17580
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Entry
U0O11_17580 CDS
T10202
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cobd Cobetia sp. D5
Pathway
cobd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0O11_17580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobd02000
]
U0O11_17580
Transporters [BR:
cobd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
U0O11_17580
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
DUF87
AAA_29
T2SSE
AAA_22
AAA_28
AAA_18
FtsK_SpoIIIE
AAA_23
MMR_HSR1
ORC-CDC6-like
AAA_21
NACHT
Motif
Other DBs
NCBI-ProteinID:
WVS98614
LinkDB
All DBs
Position
complement(4227119..4229014)
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AA seq
631 aa
AA seq
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MAGRATSNRPQDAHRESRDSSASLPPAPAAELSTGPLPEAPLRHLLLDFFTRHWPRYLLA
IAFLIGVAGLNLLLPWAIGATIDALRDGSLDHEALLSRLLWLVGAGLALYALRYAWRVTL
FGTAYQLGTEQRDAFHAKLTRLDPGFYQRHRTGDLMAHASQDIDAVEMAAAEGVLSSVDG
AMTFVLVLGIMLIAIDVPLTLLALLPFPFMAWAFARISRRIGERFRESLERFSDLNDQTQ
EAFAGIRMLRSHALLEDEGARFSQRAAAAEAVDYRVQKLEAAFDPVVFIALSAATLLTLG
VGSWRYLDDAITLGQLTSFTLYLAQLIWPMFALGWCLNILQRGAAAARRLATFHAAPQAL
EDSGTLDEVSDHSLRLEINEFSYPGSQQRALGPLSLQVAAGGSLGIVGATGSGKSTLLRL
LSRSWPLTPEQGVLTLGGREASEYTLSTWRQQFSLVPQDPFLFALSVADNVALACPEASD
ERIREALHAAAFEEDLRRLPQGLETLVGERGITLSGGQRQRLALARSLLSEAPILLLDDT
LSAVDQVTERTLLKTLARLQQPDHHGLKRTLIINSHRLSAVQACQQILVLEDGRILEQGD
HTSLLAARGAYWRLWQAQQVNREDDAKAERS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacgcgcgacatcgaacagaccgcaggatgcccatcgcgagtcccgtgactcc
agtgcctctctcccgccggcccccgccgccgaactgagcaccgggcctctccccgaggcc
ccgttgcgccacctgctgctcgatttcttcacccgccattggccccgctatctgctggcc
atcgcgttcctgatcggggtcgcggggctgaatctgctgttgccgtgggccatcggcgcc
accatcgatgcgttgcgtgatggcagcctcgaccacgaggccttgctgagccgcctgttg
tggctggtaggcgcggggctcgcgctctatgcactgcgctatgcctggcgcgtgacattg
ttcggcaccgcctatcagctggggacggagcagcgtgatgccttccatgccaagctgacg
cgcctggaccccggcttctatcagcgccatcgcaccggagacctgatggcgcacgccagt
caggacatcgatgccgtggagatggccgccgcggaaggcgtgctgtccagcgtcgatggc
gccatgaccttcgtgctggtgctcggcatcatgctgatcgccatcgatgtgccactgacg
ctgctcgccctgttgcccttccccttcatggcctgggccttcgcacgtatctcgcgacgg
atcggagagcgtttccgcgaatcgctggagcgcttctcggacctgaatgaccagacccag
gaagccttcgccggcattcgcatgctcagaagccatgccttgctggaggatgaaggcgca
agattctcgcagcgtgccgccgccgccgaagccgtcgattatcgcgtccagaagctggag
gcggcctttgatccggtggtgttcattgcactctcggcggcgacgctgctgacgctgggc
gtgggtagctggcgctatctggatgacgccatcaccctgggccaactgaccagcttcacg
ctctatctggcgcagctgatctggccgatgttcgcgcttggctggtgcctgaatatcctg
cagcgcggcgcggcagccgcacggcggctggccaccttccacgcagcgccacaagccctt
gaggacagcggcactctggacgaagtcagtgaccattcactacgccttgaaatcaatgaa
ttcagctacccgggcagccagcaacgtgctctcgggcccctctccctgcaggtggcggca
ggggggagtctggggatcgtcggcgcgaccggcagtggcaagtccaccttgctgcgtctg
ctgtcgcgcagctggcctctgacgcctgagcaaggggtcttgacgctcggtggcagagaa
gcgagtgagtacacactatccacctggcgccagcagttctcactggtcccccaggacccg
ttcctgtttgcgctctcggtagccgacaatgtcgccctcgcctgccccgaggcctccgac
gagcgaattcgagaggcgctgcacgcggcagccttcgaggaagatctgcgccgcctcccc
caggggctggagacgctggtgggtgagcgaggcatcacactctccggcggccagcgtcag
cggctggcattggcacgcagcctgctcagcgaggcgccgatcctgctgctggacgatacc
ctgtcggcggtcgaccaggtcaccgaacgcaccctgctgaagactctcgcgcgcctgcag
caacccgatcaccacggcctcaagcgcacgctgatcatcaattcccatcgcctgtctgcc
gtgcaggcctgccagcagatcctggtgctcgaggatgggcgcatcctggaacagggcgat
cacaccagcctgctggccgcccgcggcgcctactggcgcctatggcaggcccagcaggtc
aaccgcgaagacgatgccaaggcggagcgctcatga
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