Cobetia sp. AM6: CLAM6_00100
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Entry
CLAM6_00100 CDS
T08724
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00541
Biosynthesis of various nucleotide sugars
cobe01100
Metabolic pathways
cobe01250
Biosynthesis of nucleotide sugars
Module
cobe_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CLAM6_00100 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cobe01005
]
CLAM6_00100 (hldD)
Enzymes [BR:
cobe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CLAM6_00100 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
cobe01005
]
Core region
CLAM6_00100 (hldD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
BBO54699
UniProt:
A0A5K7Y530
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All DBs
Position
12553..13509
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AA seq
318 aa
AA seq
DB search
MIVVTGGAGFIGANIVKALNDRGRTDILVVDDLSDGTKFVNLADLTIADYLDKDDFLIRV
QSSLMGEYAELPKIEAIFHEGACSDTTEWDGQFMLENNFEYSKVLLNFCEANQIPFLYAS
SAATYGDSQVFKETPEFEGPLNVYGYSKLLFDQHVRQRWDSLTTQVVGFRYFNVYGPREQ
HKGKMASVAYHHHTQVKAGENPKLFGAYDGYDAGMQSRDFVYVGDVVDVNLWFLDHPEAS
GIFNLGTGRAEPFKAIAETVIEYYEKGEIEYIDFPENLKGRYQSFTRADIGKLRKAGCNV
EFKTVAQGTRAYLEWLNR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttaccggaggcgccggcttcatcggtgccaatatcgtcaaggcactcaat
gaccgcggccgtaccgatatcctggtggtggatgacctgagtgacggcaccaagttcgtc
aatctggcggacctgaccatcgccgattacctcgacaaggacgacttcctgattcgcgtc
cagtcgagcctgatgggcgagtatgccgagttgccgaagatcgaggcgatcttccacgaa
ggcgcctgctcggacaccaccgagtgggacggccagttcatgctcgagaacaacttcgag
tactccaaggtgctgctcaacttctgcgaagcgaaccagattcccttcctctacgcgagc
tccgcggcgacctacggcgacagccaggtcttcaaggaaacgccggagttcgaaggtccg
ctcaacgtctacggctactccaagctgctgttcgatcagcacgtgcgccagcgctgggac
agcctgaccacccaggtcgtcggcttccgctatttcaatgtctacggcccgcgtgagcag
cacaagggcaagatggccagcgtagcctatcaccatcacacccaggtgaaggcgggcgag
aaccccaagctgttcggcgcctacgatggctacgatgccggcatgcagagccgtgacttc
gtctatgtcggtgatgtggtcgacgtgaacctgtggttcctcgatcacccggaagcctcc
ggcatcttcaatctgggtaccggtcgcgccgagccgttcaaggcgatcgccgagaccgtc
atcgagtactacgagaagggcgagatcgagtacatcgacttcccggaaaacctcaagggt
cgctaccagagcttcacgcgtgccgatatcggcaagctgcgcaaggccggctgcaacgtc
gaattcaagaccgttgcccagggcacgcgcgcctatctcgaatggctgaatcgctga
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