Cobetia sp. AM6: CLAM6_00360
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Entry
CLAM6_00360 CDS
T08724
Name
(GenBank) ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobe03009
]
CLAM6_00360
Enzymes [BR:
cobe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
CLAM6_00360
Ribosome biogenesis [BR:
cobe03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CLAM6_00360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
VWA_N2
Motif
Other DBs
NCBI-ProteinID:
BBO54725
LinkDB
All DBs
Position
43318..44064
Genome browser
AA seq
248 aa
AA seq
DB search
MAIRLYCPDLDLNVSAGASFALPEGPARHLGLVLRAKVGSEAQLFDGRGQEVRVLLEEVT
RKGVSVQVIEAVPNDREAPLAVHLGQAISKGDRMDYAIQKACEMGVAAITPLYTARGDVK
LKGERADKKLAHWQGVAASACEQCGRSVVPVVHAPVAMTQWLSERDEPLRLILQPGGAEA
LNVAEAEGGVTRASLLIGPEGGFTQEEVAEAAAAGCEVLGLGPRILRTETAPVVALTLLQ
QRFGDLPR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccatccgtctgtactgccccgatcttgatctcaatgtcagcgccggggcgtccttc
gcgctccccgaggggcctgcacgccacctcgggctggtgctgcgtgccaaggtcggcagt
gaggcgcagctgttcgatggccgtgggcaggaggtgcgcgtgctgctggaggaggtgacc
cgcaagggcgtcagcgtgcaggtgatcgaggcggtgcccaatgaccgcgaggcgccgctg
gcggtgcatctggggcaggcgatctccaagggcgatcgcatggattacgccatccagaag
gcctgtgagatgggcgtggctgccatcacgccactctacaccgcgcgtggcgacgtcaag
ctcaagggcgagcgcgccgacaagaagctggcgcactggcagggcgtggcggccagcgcc
tgcgagcagtgcggaagaagcgtcgtgccggtcgtgcatgccccggtggcgatgacgcag
tggctgtccgagcgtgatgagccgctgcgcctgattctgcagccgggcggtgccgaggcg
ctgaacgtggccgaggccgagggcggcgtgacccgtgccagcctgctgatcggcccggaa
ggcggcttcacgcaggaagaggtggcagaagcggccgcagccggttgtgaagtgctcggc
ctggggccgcgtatcctgcgcaccgagacggcgccggtggtggcgctgaccttgctgcag
cagcgatttggtgacctgccgcgctga
DBGET
integrated database retrieval system
