Cobetia sp. AM6: CLAM6_00470
Help
Entry
CLAM6_00470 CDS
T08724
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00900
Terpenoid backbone biosynthesis
cobe01100
Metabolic pathways
cobe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLAM6_00470 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cobe01006
]
CLAM6_00470 (ispA)
Enzymes [BR:
cobe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CLAM6_00470 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CLAM6_00470 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CLAM6_00470 (ispA)
Prenyltransferases [BR:
cobe01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CLAM6_00470 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BBO54736
UniProt:
A0A5K7XYC0
LinkDB
All DBs
Position
52905..53837
Genome browser
AA seq
310 aa
AA seq
DB search
MSGGLNTQVTPTASQASELIRSGQARSEAVLEALLTPGSAAVSERLEDAMRYSVLGGGKR
LRPVLLYAVGRALGCDEEAADRAALDAAAAALELVHAYSLVHDDLPAMDDDDLRRGRPTV
HRAFDEATAILAGDALLTLSFEVMATTGHVRTPALVRTLAEASGRRGMVAGQALDLEAVG
QFREVEALSRMHAYKTGALIRAAVRLGGLVAVDEQDSRLAALERYASAIGLAFQIQDDIL
DVTGDTATLGKTAGADAARDKPTYPSLLGLEGAQERAGQLLQEALDALAPLGEAAEPLAV
LARYMIERDH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggattgaatacgcaagtcacgccgactgcatcgcaggccagcgagctgatc
cgctctggacaggcgcgcagtgaggccgtgcttgaggcgttgttgactcccggcagtgcg
gcggtgagtgagcgtctcgaggacgccatgcgctacagcgtgctgggtggcggcaagcgt
ctgcgtcccgtgctgctgtatgcggtgggtcgtgccctgggctgcgatgaagaggccgct
gaccgcgctgcgctggacgcggcggcagcggcgctcgaattggtgcatgcctattcgctg
gtccatgatgacctgccggccatggacgatgacgacctgcggcgtggccgtcccaccgtg
catcgcgccttcgatgaggcgaccgccattctcgcgggcgatgccctgttgacgctctcc
ttcgaagtgatggcgacgaccggccatgtacggacacctgccctggtgcgtaccctggcc
gaggcctccgggcggcgcggcatggtggccggtcaggcgctggatctcgaggcggtcggg
cagttccgtgaggtagaggcgctgtcacgcatgcatgcctacaagaccggcgcgctgatt
cgcgctgcggtccgtctgggcggattggtggcagtcgacgagcaggattcgcgtcttgct
gccctggagcgctacgcttcggctatcggcctggccttccagatccaggatgacatcctg
gacgtgacgggcgacaccgcaacgcttggcaagacggccggtgctgacgctgcgcgcgac
aagccgacctatccctcgctgcttggactcgaaggtgctcaagagcgagcaggtcagcta
ctgcaagaggccctggatgccctggcaccgttgggagaggccgcagagccactcgcggtg
ctggcgcgctacatgatcgagcgagaccactga
DBGET
integrated database retrieval system