Cobetia sp. AM6: CLAM6_01150
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Entry
CLAM6_01150 CDS
T08724
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobe03009
]
CLAM6_01150
Enzymes [BR:
cobe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CLAM6_01150
Ribosome biogenesis [BR:
cobe03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CLAM6_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ribosomal_S9
Motif
Other DBs
NCBI-ProteinID:
BBO54804
LinkDB
All DBs
Position
122464..123228
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AA seq
254 aa
AA seq
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MRLDRWLTRQPQLNRRHALSALAAGRVRVNGATISDPLHEVGPFDDIHLSAPDATVCLQI
ARRPRHILLNKPAGVVTACHDPEHPTVIDVLRDTLNARGEDSGWLAEIHHVGRLDRATTG
ALLLTNDGEVSARISDAGLEGPAKRYRMGLERPLSEAEQESAITQVRQGVLLEHDPRPTL
PAKLAFLTADQPRLTLHEGRHHHVKRLWRSLGNRVVWLHRESVAGLSLEGLAPGEWRELT
REECSRLGAAQPRG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggaccgctggctgacacgtcagccacagctcaaccgtcgtcatgcgctctcg
gcgctggcagcggggcgcgtgcgggtcaacggcgcgacgatcagcgacccgctgcatgag
gtcggccccttcgatgacatccacctgtcagcgcctgacgcgaccgtctgcctgcagatc
gcgcggcgtccgcgtcatatcctgctcaacaagcccgccggggtcgtgacggcctgtcat
gacccagaacaccccaccgtgatcgatgtgctgcgtgacacgctgaatgcacgcggcgag
gacagcggctggctggccgagatccaccatgtcgggcgtctcgaccgtgcgacgaccggt
gccctgctgctgaccaacgacggcgaagtctcggcgcgcatcagcgatgccgggctcgag
gggcccgccaagcgctatcgcatggggctggagcggcccctgtcggaggccgaacaggaa
agtgccatcacacaggttcgtcagggggtgctgctcgaacatgatccgcgcccgacactg
ccggcaaagcttgcgtttctcaccgcggaccagccacgcctgacgctgcacgagggacgc
catcaccacgtcaagcgactgtggcgtagcctgggcaatcgcgtggtgtggctgcaccgt
gagtcggtggcgggcttgagtctcgaagggctggcgccgggggagtggcgcgagcttacc
cgcgaggagtgttcacggctgggggccgcgcagcctcgcgggtga
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