Cobetia sp. AM6: CLAM6_01760
Help
Entry
CLAM6_01760 CDS
T08724
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobe03016
]
CLAM6_01760 (truB)
Enzymes [BR:
cobe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLAM6_01760 (truB)
Transfer RNA biogenesis [BR:
cobe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLAM6_01760 (truB)
Prokaryotic type
CLAM6_01760 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBO54865
UniProt:
A0A5K7YAL5
LinkDB
All DBs
Position
190866..191795
Genome browser
AA seq
309 aa
AA seq
DB search
MARRRRGLPIDGVLLLDKPKGMSSNYALQKARRLYQAQKAGHTGTLDPMATGLLPVCFGE
ATKFSSHLLEADKVYRARIKFGQVTDTGDAEGTVIREREIPEIAQAELDAVLDRFRGEID
QVPPMYSALKHQGRPLYELARQGIEIERAVRRVTIYNMALLARHSDGIEIEVAVSKGTYI
RSLAEDIGEALGCGAHLTALRRLKTGPFTGDAMLDFERLEALADQQAREGVLLPVDILLD
HLPRLDITAEMARMILRGQQAETTTGSLEVDSLARVYQDQQLLGLVRIAAEGVIAPRRLL
SSAVEAAAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgtcgcggcttgccgatcgatggcgttctgttgctggacaagcccaag
ggcatgtccagcaactatgcgcttcagaaggctcgtcgcctctaccaggcgcagaaggcc
ggtcataccggcacgctcgacccgatggcgaccggcttgttgccggtctgcttcggggaa
gcgaccaagttctcctcgcatcttctcgaggcagacaaggtctatcgggcacggatcaag
tttggccaggtcaccgataccggtgatgcggaaggcacggtgattcgcgagcgggagatt
cccgagattgcgcaggccgagctggacgcggtgctggacaggttccgtggcgagatagat
caggtaccgccgatgtactccgcgctcaagcaccagggacgtccgctctacgagctggcg
cgccaggggattgaaatcgagcgtgcagtccgtcgcgttaccatctacaatatggcgctt
cttgcgcggcactccgatggcatcgagatcgaagtggcggtcagcaagggtacctacata
cgcagtctggccgaggatatcggcgaggcgctgggctgtggagcccacctcacggcactg
cgtcgtctcaagacgggcccgttcacgggtgatgccatgctggatttcgagcgcctcgag
gcgctggctgaccagcaggcacgtgaaggcgttctgttacctgtcgacatcctgctcgat
catctcccgcgtctcgacatcactgccgagatggcgcggatgatattgcgtggtcaacag
gctgaaacgacgacagggtcgctggaagtggactccctggctcgtgtgtatcaggaccag
cagttgctcgggctggtccggattgcggcggagggcgtcatcgctcctcgccgactgctc
agttctgccgtcgaggcggcggctgggtga
DBGET
integrated database retrieval system
