Cobetia sp. AM6: CLAM6_01840
Help
Entry
CLAM6_01840 CDS
T08724
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAM6_01840 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobe03019
]
CLAM6_01840 (pcnB)
Enzymes [BR:
cobe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CLAM6_01840 (pcnB)
Messenger RNA biogenesis [BR:
cobe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLAM6_01840 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
BBO54873
LinkDB
All DBs
Position
complement(199074..200474)
Genome browser
AA seq
466 aa
AA seq
DB search
MLKGFTRFLQRPGDRLKTLFNATDAPAAPLPSLRVIPRDEHPVSRRQLSENALKVLYRLQ
SGGYQAYLVGGCIRDALLGQRPKDFDVATNATPEQVRELFRNARIIGRRFRIVHVRFGRE
VIEVTTFRGKPADSTPSQHTQQSEDGMLLRDNVFGSIEEDALRRDFTINALYYDVSDFTI
HDWANGVRDIEARMIRLIGDPETRYREDPVRMLRAVRFAGKLDFDIEEATAEPMYELAPL
LLQIPPARMFEEVLKLFMSGYALETFHLLREFGLFQMLFPETEESFAHYHWSMPLIEKAL
ASTDDRIREDKPVTPAFLYAALLWPGVKARTDQLIASGMPDIPAAHQAAQQAIARQLNHT
SIPKRFSIPMREIWDMQAKLPRRRGKRAFQTREHPRFRAAYDFLLLREFAGEVKPGLGKW
WTDFQEVDARTQVTMIEGVSDEGPAGSKPVGTKRRGKRRRNGRGQG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaggatttacccgctttctacaacgccccggtgaccgcttgaagacgcttttc
aatgcaactgacgcgcccgcggccccattgcccagcctgcgtgtgataccgcgggatgag
catcccgtgtcccgccgccagctcagcgagaatgcgctgaaggtactctatcgcctgcaa
agcggtggatatcaggcctatctggtcggtggctgtatccgtgatgccctgctcggacaa
cgccccaaggacttcgacgtggccaccaacgccacgccggaacaggtccgcgagctgttc
cgcaatgcccgcatcatcggccgtcgtttccgtatcgtgcacgtgcgcttcggtcgtgag
gtgatcgaggtcaccaccttccgcggcaagccggccgatagcacgcccagccagcatacc
cagcagtcggaagacggcatgctgctgcgtgacaacgtcttcggctccatcgaggaggac
gcgctgcgccgcgacttcacgatcaatgccctctattacgacgtgtccgacttcacgatc
cacgactgggccaatggtgtacgcgatatcgaagcgcgcatgattcgcctgatcggcgat
ccggaaacacgctatcgcgaagacccggtgcgcatgctgcgtgccgtccgcttcgccggc
aagctggacttcgacatcgaggaggccacggccgaaccgatgtacgaactggccccgctg
ctgctgcagattccgccggcgcgcatgttcgaggaagtgctcaagctgttcatgtccggc
tatgcactggaaaccttccatctcctgcgtgagtttggtctgttccagatgctgttcccc
gagacggaagagagcttcgcgcattatcactggtccatgccgctgatcgagaaggcgctg
gccagcacggacgaccgcatccgcgaagacaagccggtcacgccggccttcctgtatgcc
gccctgctgtggccgggcgtcaaggcgcgtaccgaccagctgatcgccagtggcatgccc
gatattccggcagcccaccaggcggctcagcaggcgatcgctcgccagctcaaccatacc
tcgatcccgaagcgcttcagcattccgatgcgcgagatctgggacatgcaggccaagttg
ccgcgtcgccgtggcaaacgcgccttccagacccgcgagcatccgcgcttccgcgccgcc
tacgacttcctgctgctgcgcgaattcgccggtgaagtgaagccggggctgggcaagtgg
tggaccgacttccaggaagtcgatgctcgcacccaggtcacgatgatcgaaggtgtctcc
gatgaaggccccgccggcagcaagccggtcggcaccaagcgtcgcggcaagcgtcggcgc
aatggtcgcggccagggctga
DBGET
integrated database retrieval system
