KEGG   Cobetia sp. AM6: CLAM6_02080
Entry
CLAM6_02080       CDS       T08724                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
cobe  Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:cobe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cobe03400]
    CLAM6_02080 (radA)
DNA repair and recombination proteins [BR:cobe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CLAM6_02080 (radA)
SSDB
Motif
Pfam: AAA_25 ATPase Zn_ribbon_LapB ChlI Lon_C DnaB_C AAA_22 AAA_16 SLFN-g3_helicase AAA AAA_14 ABC_tran AAA_24 AAA_5 nSTAND3 KdpD NTPase_1 Viral_helicase1 AAA_30 Zeta_toxin GvpD_P-loop AAA_29 cobW KTI12 T2SSE NACHT
Other DBs
NCBI-ProteinID: BBO54897
UniProt: A0A5K7Y2X5
LinkDB
Position
229006..230418
AA seq 470 aa
MAKAKSAFVCTECGSEFSKWQGQCSGCREWNTLQEIRVGATVLPGAAPAAGAVAGGAARS
ASNGRGGYAGTLSDNVTDLSNVSLAEVPRFSSTFGEFDRVLGGGLVPGSAVLLGGHPGAG
KSTLLLQTACKLAQHKRSLYVTGEESLSQVAMRAHRLQLPTQGLKMLAETSVETILATAE
REKPEVLIIDSIQTMHLEDLSSAPGGVSQVRESAAALTRFAKRTNTVLLLVGHVTKDGSL
AGPKVLEHMIDASLLLEGDGDSRFRTLRGQKNRFGAVNELGVFAMVELGLKEVKNPSAIF
LSRSEEQSSGSLVMVVWEGTRPILIEVQALLDDSPLGNPRRVAVGLDGNRLSMLLAVLNK
HGGLFTGDQDVFLNVVGGVKVLETSADLAVLCAVVSSLQNRPLPRELVVFGEVGLSGEIR
PVPSGQERIVEAAKHGFTRAIVPKGNAPKNPPKGMTIVAVDKLSQALEAL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggcgaaagcaaagagcgccttcgtatgtaccgaatgcggtagcgaattctcgaagtgg
cagggccagtgcagcggctgccgcgagtggaacaccctgcaggaaatccgcgtcggcgcc
acggtattgcccggcgccgcccccgctgcgggagccgtcgccggtggtgccgcgcgtagc
gccagcaatgggcggggcggctacgccggcacgctcagcgacaacgtgaccgatctttcc
aatgtctcgctggccgaagtgccgcgcttctcctcgaccttcggcgagttcgaccgcgtg
ctgggtggcgggctggtgccgggttccgccgtgttgctcggtggccacccgggggccggc
aagtcgacgctgctgctgcagaccgcctgcaagctcgcccagcacaagcgctcactctat
gtcactggcgaggaatcgctgtcgcaggtggcgatgcgcgcccatcgtctgcagctgccg
acccaggggctcaagatgctggccgagaccagcgtcgagacgattctggccaccgccgag
cgcgagaagcccgaggtgctgatcatcgactccatccagaccatgcatctggaggatctg
tcatccgcgccggggggtgtctcgcaggtgcgtgagtctgccgccgcgctgacccgcttc
gccaagcgaaccaataccgtgctgctgctggtcggccacgtgaccaaggacggctcactg
gccggacccaaggtgctggagcacatgatcgacgcctccctgctgctggagggcgatggt
gattcgcgcttccgcacgctgcgtggccagaagaaccgcttcggcgcggtcaacgagctg
ggcgtgttcgccatggtcgagctgggcttgaaggaggtgaagaaccccagcgcgatcttc
ctgtcgcgcagcgaggagcaatcctccggcagtctggtgatggtggtgtgggagggcacg
cgaccgatcctgatcgaagtgcaggccttgctggatgactcgccgctgggcaatccacgc
cgtgtcgccgtcggtctggacggcaatcgcctgtcgatgctgctggcagtgctcaacaag
catggcggcctgttcacaggcgatcaagatgtcttcctgaatgtggtcggcggggtcaag
gtgctcgagaccagcgccgacctcgcggtgctgtgtgcggtggtctccagcctgcagaac
cgtccgctgccgcgcgagctggtggtgttcggcgaggtggggctgtccggcgagatccgt
ccggtgccgagtggccaggagcgcatcgtcgaggccgccaagcatggctttacgcgcgct
atcgtgcccaagggcaatgcccccaagaatccgcccaagggcatgaccatcgtggcggtc
gacaagctgtcccaggcgctggaagccctgtga

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