Cobetia sp. AM6: CLAM6_02240
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Entry
CLAM6_02240 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K10912
two-component system, repressor protein LuxO
Organism
cobe
Cobetia sp. AM6
Pathway
cobe02020
Two-component system
cobe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLAM6_02240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLAM6_02240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cobe02022
]
CLAM6_02240
Two-component system [BR:
cobe02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
CLAM6_02240
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BBO54913
LinkDB
All DBs
Position
complement(246513..247454)
Genome browser
AA seq
313 aa
AA seq
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MQTLYRTLIQVAHSDAPIFITGESGSGKELCATAIHRHSPVRDGPFIAVNCAAIPAELLE
SQLFGHVRGAFTGAVSAQQGLAVAADGGTLFLDEIAELPLPLQSKLLRFLQTGQVMPVGA
TRTVEVNCRIVCATHQNPRVLVDTHRFREDLFYRLHVIPLKVPPLRERGQDILEIATGLL
GRMAGHEGKRFTRLSACAERQLLAHDWPGNVRELENTLRRAIILNDGEVLTADMLDLPSS
TAHRPSVSHSAPEGSETTLRPLWMVEREAIESVISACDGSIPRAAAILEIAPSTIYRKRL
SWLAMHPDEPTSH
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgctctatcgcactctcatccaggtcgcccactcggacgctcccatcttcatc
accggcgaaagcggcagcggcaaggaattgtgtgccactgccattcaccgccatagcccg
gtacgtgacggcccgttcatcgccgtcaattgtgccgccattccggcagagctgctggag
tcgcaattgttcggacatgtgcgcggggctttcacgggggccgtgagcgcccagcagggg
ctcgccgtggcggcagatggggggacgctgtttctcgatgagatcgcggagctgccgcta
cccttgcagagcaagctgctgcgcttcctgcagacaggacaggtaatgccggtgggtgcc
acgcgcacggtagaggtcaattgccgcatcgtgtgcgccacgcatcagaacccgcgggta
ctggtcgatactcaccgcttccgggaagacctcttctatcgtctgcacgtcatcccgctg
aaggtgccgccgctgcgcgagcgcggtcaggatatcctggaaatcgccaccgggctgttg
gggcgcatggcaggccacgagggcaagcgcttcacacgactcagtgcatgcgccgagcgt
cagttgctggcccatgactggcccggcaatgtgcgggagctggaaaacacgctgcggcgc
gccatcatcctcaacgatggtgaggtgctgacggccgacatgctggacctgccctccagc
acggcgcatcgcccgtcggtcagccacagcgcgccggagggcagcgagaccacgttgcgc
ccgttgtggatggtcgaacgcgaggcgatcgagagcgtcatcagcgcctgtgatggcagt
atcccccgcgctgcggcgatactggagatcgccccctccaccatctatcgcaagcgcctg
agctggctggcgatgcacccggacgagcccacctcgcactga
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