Cobetia sp. AM6: CLAM6_03060
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Entry
CLAM6_03060 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobe03016
]
CLAM6_03060
Enzymes [BR:
cobe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
CLAM6_03060
Transfer RNA biogenesis [BR:
cobe03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CLAM6_03060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BBO54995
LinkDB
All DBs
Position
complement(340468..341406)
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AA seq
312 aa
AA seq
DB search
MPSSSDAPHSEAPTAPQTPAPMADATPTSLEAKSAEVTEPAEPVELTEPAEPLDILFQDE
VLVVVHKPSGLLVHRSPIDKHETEFLLQRLRDQIGQHVFPVHRLDRPTSGLMVFGLSPQA
ARKLSTAFEEQQVSKRYLAIVRGVAPEQQRLDYGLRKEDGKLPKAEMPEQEAITDTRRLA
QVELPIAIDRYPQSRFSLVEAHPLTGRRHQIRRHLSRRGYPIIGDAKHGKGNYNRYFATT
LECPRLLLAAVGLELPHPEGGWLSLSCPPEGAYAALMERFGWLGHLPERYAEHLAERPTR
HWLDASADDPAD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgccctcttcttctgatgctccgcactccgaggcgccgacggcgcctcagacacctgcg
ccgatggcggacgccacgcccacgtctctcgaggccaagtctgctgaggtgactgagccg
gctgagcctgttgagctgactgaacccgccgagccactcgacatcctgttccaggatgag
gtgctggtggtggtccacaagccatcgggcctgctggtgcaccgcagccccatagacaag
cacgagaccgagtttctgcttcagcgtctgcgcgaccagatcggccagcatgtcttcccc
gtgcatcgcctcgatcgtccgacatcagggctgatggtgttcggcctctcgccccaggcg
gcgcgcaagctgagcaccgccttcgaggagcagcaggtcagcaagcgctatctggcgata
gtgcgcggtgtcgcgcccgagcagcaacgcctcgattacggcctgcgcaaggaagatggc
aagctgcccaaggccgagatgccggagcaggaagccatcaccgacacgcgccgcctggca
caggtcgagctgcccatcgccatcgatcgctacccgcagtcgcgcttctcgctggtcgag
gcccatccgctgaccggtcgccgccaccagattcgccgtcacctgtcacgccgtggctac
ccgatcatcggcgacgccaagcatggcaagggcaactacaatcgctacttcgccacgaca
ctggaatgcccccgcctgctgctggcggctgtcgggcttgagcttcctcatcccgaaggt
ggctggctgagcctgtcgtgtccgccagaaggtgcctacgcggcactgatggagcgcttc
ggctggctgggccatctgcccgaacgctacgctgaacatctggcagagcgcccgaccaga
cactggctcgatgcatccgccgacgacccggctgactga
DBGET
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