Cobetia sp. AM6: CLAM6_03890
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Entry
CLAM6_03890 CDS
T08724
Symbol
mnmC
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobe03016
]
CLAM6_03890 (mnmC)
Enzymes [BR:
cobe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
CLAM6_03890 (mnmC)
Transfer RNA biogenesis [BR:
cobe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CLAM6_03890 (mnmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
NAD_binding_8
NAD_binding_9
FAD_binding_2
Pyr_redox
3HCDH_N
FAD_binding_3
AlaDh_PNT_C
GIDA
HI0933_like
MurD-like_N
NAD_Gly3P_dh_N
Thi4
FAD_oxidored
ThiF
ApbA
Glyco_transf_4
UDPG_MGDP_dh_N
Lycopene_cycl
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BBO55078
UniProt:
A0A5K7Y236
LinkDB
All DBs
Position
complement(437556..439715)
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AA seq
719 aa
AA seq
DB search
MVPDVPLAPLAALEEAQLEWDDTAPQATDYGDVYFSIHDGRAETVHVFLDSNRLSERFRD
WRGARPFVIGETGFGTGLNILCAAQRFLATAPAEARLHVISVEKHPMRAADLERALSAWP
DLASLAKPLVAQWPAAVLGVHRLWLDERITLDLHFGDAVERLSRLEGGVDAWFLDGFSPS
KNPQMWSPELFAAMAGVSRPTATFATFTAAGFVRRGLRAAGFVWRKVPGHGMKREMICGE
LDEPTAAARAELMGLDASPASGHAPMQEHAVRGALHPLRREQPWTQAPQPAPISRESHVA
VLGAGIAGTSCAEALARRGVQVTLIDAEAPGARASGNRQGALYVKLAAETNPASRFQLAA
LQYSRRWLASLDPEQTLWSASGVLQLATSERERKRQQRFLDNHPLPEALLKPVSASEASR
IAGSEIAFDGLFYPVAGWVRPSALCQHLAATPGIRFLQARIEAIQSLEAEESGATGNGAP
RWQLQTSDGTSMEVDQLIVAQGEQTHLPEPLAHLPLQPIRGQVSEITVAAEHAALLPALD
SVVCAGGYVSPYQRHADGSVTLSFGATFAPRDEDEAVREADHAANVAELRSALPAFVAAW
EQARGVRLEDDDWQGRVAWRAASPDKSPLAGPAPDAAQWREDYAAMAFDAKKRVPQSSGA
HLPGLWLSTAHGSRGFTTAPLCAELIASRLCGEPLPLERELAEHLHPGRRLIRDIVQRR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggtgccggacgtaccactggcgccactggcggcattggaggaggcgcagctcgagtgg
gacgacaccgcaccacaggccaccgattacggcgatgtgtacttctcgatccacgatggc
cgcgccgagaccgtgcacgtcttcctcgacagcaaccggctgagcgagcgcttccgtgac
tggcggggagcgcgccccttcgtgatcggcgagaccggcttcggcaccggcctcaacatc
ctgtgcgccgcccagcgctttctggcaacggcgcccgccgaggcgcgcctgcatgtcatc
tcggtggaaaagcacccgatgcgcgccgcggatctcgagcgggcgctgtccgcctggccg
gacctcgcctcactggcgaagccgctggtcgctcaatggcccgctgccgtcctcggcgtg
caccgcctgtggctggatgagcgcatcaccctggacctgcacttcggcgatgcggtggag
cgcctgtcgcgcctggaaggtggcgtggatgcctggttcctcgatggcttctcgccgtcg
aagaatccgcagatgtggtcacccgagctgttcgcggccatggcaggtgtctcgcgcccc
acggcgaccttcgccaccttcaccgccgcgggcttcgtgcggcgtggcctgcgcgcggca
ggcttcgtgtggcgcaaggtgcccggccacggtatgaagcgcgagatgatctgcggcgag
ctggacgagccgaccgccgccgcgcgcgccgagctgatggggcttgatgcctcacccgca
tccggccatgcccccatgcaggagcacgcggtgcgtggcgcccttcatccgctgcgtcgt
gagcagccctggactcaggctccgcagcccgcgcccatttctcgcgagtcgcatgtcgcg
gtactcggcgccggtatcgccggcaccagctgcgccgaggcgctggcgcggcgcggcgtg
caggtcacgctgatcgatgccgaagcccccggcgcgcgcgcctccggcaatcgccagggc
gcgctctacgtcaagctggccgccgagaccaatcccgccagtcgcttccagctggccgcg
ctgcagtacagccggcgctggctggcaagcctcgaccccgagcagaccctgtggtccgcc
agcggcgtgctgcagctggccaccagtgaacgtgagcgcaagcgccagcagcgcttcctc
gacaatcacccgctgcccgaggcgctgctcaagccggtcagcgccagcgaggccagccgg
atcgccggcagcgagatcgccttcgacggcctcttctatccggtcgccggctgggtgcgc
cccagcgcgctctgccagcacctcgccgccaccccgggcatccgctttctgcaggcgcgc
atcgaggccattcagtcgctggaagccgaggaaagcggggccactggcaacggcgcgcca
cgctggcagctgcagaccagcgacggcaccagcatggaagtcgatcagctgattgtcgcg
cagggggagcagactcacctgcccgagccgctcgcgcatctgccgctgcagccgattcgc
ggccaggtcagcgagatcacggtagcggcggaacacgccgcgctcctgccagcgctcgac
agcgtggtgtgcgccggtggctatgtctcgccctatcagcgccacgccgatggcagcgtg
accctcagcttcggcgcgaccttcgccccacgcgatgaggatgaggcggtccgcgaggcg
gatcacgccgccaatgtcgctgaactgcgcagtgccttgcccgccttcgtcgccgcctgg
gagcaggcgcgtggcgtcaggctggaagacgatgactggcagggacgtgtcgcctggcgc
gccgccagcccggacaagagcccgctggccggcccggcaccggacgccgcgcaatggcgt
gaggactacgccgccatggccttcgatgcgaaaaagcgcgtgccacagtcgagcggcgcc
cacctgcccggcctgtggctctccaccgcacacggctcacgcggcttcaccaccgccccg
ctgtgcgctgagctgatcgcctcgcgactgtgcggcgaaccgctgccgctggaacgcgaa
ctggccgagcacctgcacccgggacgccgcctgatccgcgatatcgtccagcggcgctga
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