Cobetia sp. AM6: CLAM6_04020
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Entry
CLAM6_04020 CDS
T08724
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLAM6_04020 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_04020 (xseA)
Enzymes [BR:
cobe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CLAM6_04020 (xseA)
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CLAM6_04020 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBO55091
LinkDB
All DBs
Position
complement(454042..455409)
Genome browser
AA seq
455 aa
AA seq
DB search
MFETSSAANAISVTQLNREAKGLLERGLGELWIEGEISGFSQPRSGHCYFTLKDDNAQVR
CALFKSRAQFLREKPRDGDRVRVRAKVSLFEARGDYQLIVEALQQAGLGEWLARLARLRE
QLAAEGVFANQRALPHPPRHLGVITSATGAALQDVIAVTRKRWPQAHLSVLPVAVQGPQA
VPQLIRAVAMANRDSDCDALLITRGGGSLEDLWAFNDQHLARAIFHSRLPVVAAIGHETD
TTLAELAADLRAPTPSAAAEALYPDQRAQVQQLTALKQRLWRAQRARLDQAAQRLDHARS
RLRHPARELETQRQRARELERRLHTAVRMRMTSEQQKADQLTRRLQQASPARDIQRHRQQ
LAMLTPRLNNALPRRLAADRERLEGAMRALNAVSPLNVLNRGYAIVERVGSQTPAPGDSK
VIRAAHQTQPGEMLSIRLGEGRLAVEVKRRYKPRP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaaacctcgtctgccgccaacgccatcagcgtgacccagctcaaccgcgaggcc
aagggcctgctggagcgaggcctgggggagctctggatcgagggggagatctcgggcttt
tcgcagccgcgctccggccactgctacttcacgctcaaggatgacaacgcccaggtgcgc
tgtgcgctgttcaagagccgcgcccagtttctgcgcgagaaacccagggatggcgatcgg
gtgcgggtgcgcgccaaggtgtcgctgttcgaggcgcgtggcgactatcagctgatcgtc
gaggcgttgcagcaggcggggctgggggagtggctggcgcgactggcacgcctgagggag
caactggcggccgagggcgtgttcgccaatcagcgcgccctgccccatccgccgcgccat
ctgggcgtgatcacctccgccaccggcgcggcgctgcaggacgtgatcgcggtgacgcgc
aagcgctggccgcaggcgcatctgagcgtgttgccggtcgccgtgcaggggccgcaggcg
gtgccgcagctgattcgcgcggtggcgatggccaatcgcgacagcgactgtgatgcgctg
ctgatcacgcgtggcggcggcagcctggaagacctgtgggccttcaatgatcagcatctg
gcgcgcgccatcttccactcgcgcctgccggtggtggccgccatcggccacgagaccgac
accaccctggcggagctggccgccgacctgcgcgcgccgacgccctctgctgctgccgag
gcgctgtacccggaccaacgcgcccaggtgcagcaactgaccgccctcaagcagcgcctg
tggcgcgcgcagcgtgcccgcctcgatcaggcggcgcagcggctggatcatgcccgctcg
cgcctgcgtcatccggcgcgtgagctggaaacccagcgccagcgtgcccgcgagctggaa
cgccgcctgcacaccgcagtgcgcatgcgcatgaccagtgagcagcagaaggccgatcag
ctgacccgccgcctgcagcaggccagccccgcgcgcgatatccagcgccatcgtcagcaa
ctggcgatgctgaccccgcgcctcaacaacgccctgccacgtcgcctggccgctgatcgt
gagcgcctggaaggcgcgatgcgcgcgctgaatgcagtcagcccgctcaatgtgctcaac
cgtggctacgccatcgtcgagcgtgtcggcagccagacgccggcacccggcgacagcaag
gtgattcgcgccgcccaccagacccagcccggcgagatgctctcgatccgcctcggcgaa
ggccgcctcgccgtcgaggtcaaacgccgctacaagccgcgcccctga
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