Cobetia sp. AM6: CLAM6_04570
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Entry
CLAM6_04570 CDS
T08724
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00260
Glycine, serine and threonine metabolism
cobe00460
Cyanoamino acid metabolism
cobe00630
Glyoxylate and dicarboxylate metabolism
cobe00670
One carbon pool by folate
cobe00680
Methane metabolism
cobe01100
Metabolic pathways
cobe01110
Biosynthesis of secondary metabolites
cobe01120
Microbial metabolism in diverse environments
cobe01200
Carbon metabolism
cobe01230
Biosynthesis of amino acids
cobe01240
Biosynthesis of cofactors
cobe04981
Folate transport and metabolism
Module
cobe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CLAM6_04570 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CLAM6_04570 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLAM6_04570 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CLAM6_04570 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CLAM6_04570 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CLAM6_04570 (glyA)
Enzymes [BR:
cobe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CLAM6_04570 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BBO55146
UniProt:
A0A5K7XZ76
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All DBs
Position
525872..527182
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AA seq
436 aa
AA seq
DB search
MSQQHGYTRDDRLARLDPALAEAILEETARQEAHIELIASENYASPLVMEAQGSQLTNKY
AEGYPGKRYYGGCEFVDKVETLAIERACALFGCDYANVQPHSGAQANAAVFMALVSPGDT
ILGMSLAHGGHLTHGAAPNFSGKHYNAIQYGLTESGELDYEEMERLAREHKPKMIIAGFS
AYSRVVNWRRFRDIADEIGAWLMVDMAHVAGLVAAGHYPSPLPYAHVVTTTTHKTLRGPR
GGLILSATGDEALHKKLNGAVFPGQQGGPLMHVIAAKAAAFKEAMSQDFVSYQARVIANA
RVMAEVFMARGYDVVSGGTDDHLFLVSLIRQGVTGKDADASLGRAHITVNKNSVPNDPQS
PFVTSGLRIGTPAATTRGFGEAECEALAGWICDLLDALSTGESAKVEAEVRGKVEEVCAR
FPVYASNSVTDPAALA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaacatggctacacccgtgatgaccgactggccagactcgaccctgcactg
gccgaggccatcctcgaagagacagcgcgtcaggaagcgcatatcgagctgatcgcctcc
gagaactatgcaagcccgctggtgatggaggctcagggcagtcagctgaccaacaagtac
gccgaaggctatcccggcaagcgctactacggcggctgcgaattcgtcgacaaggtcgag
acgctggccatcgagcgcgcctgtgcgttgttcggctgtgactacgccaacgtgcagccg
cactccggcgcccaggccaacgcggccgtgttcatggcactcgtctcgccgggcgacacc
atcctcggcatgagcctggcgcatggtggccacctgacccacggcgcggcgcccaacttc
tccggcaagcactacaacgccatccaatacggcctgaccgagagcggcgagctggactac
gaggaaatggaacgtctggcgcgcgagcacaagccgaagatgatcatcgccggcttctcc
gcctactcgcgggtggtcaactggcgtcgcttccgcgatatcgccgacgagatcggcgcc
tggctgatggtcgacatggcccacgtggccggtctggtcgcggcgggtcactacccgagc
ccgctgccctacgcccatgtcgtcaccaccaccacgcacaagacgctgcgcggcccgcgc
ggtggcctgattctctccgccaccggtgatgaagcgctgcacaagaagctcaatggcgcc
gtcttccccggccagcagggcggcccgctgatgcacgtcatcgccgccaaggccgcggcc
ttcaaggaagcgatgagccaggacttcgtcagctatcaggcccgcgtgatcgccaatgcc
cgcgtgatggccgaggtcttcatggcgcgcggctatgacgtggtctccggcggtaccgat
gaccacctgttcctcgtctcgctgatccgtcagggcgtgaccggcaaggacgcggatgcc
tcactgggccgcgcccatatcaccgtcaacaagaacagcgtgccgaatgacccgcagagt
cccttcgtgacatccgggctgcgcatcggcactccggccgccaccacgcgcggcttcggc
gaggcggaatgcgaggcactggccggctggatctgtgatctgctcgacgcgctgtccacc
ggcgagagcgccaaggtggaagccgaggtgcgcggcaaggtcgaggaagtctgtgcccgc
ttcccggtctatgcatcgaacagcgtgaccgaccccgccgcgcttgcctga
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