Cobetia sp. AM6: CLAM6_04830
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Entry
CLAM6_04830 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_04830
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLAM6_04830
Archaeal homologous recombinant proteins
CLAM6_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
nSTAND3
RsgA_GTPase
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
BBO55172
UniProt:
A0A5K7Y6U1
LinkDB
All DBs
Position
complement(560851..564396)
Genome browser
AA seq
1181 aa
AA seq
DB search
MKILALRLDNLASLAGTHEVDFEKAPLSDAGLFAITGPTGAGKSTLLDALCLALYGTTPR
LRQTPSGGQLEDVGEHQLTLKDPRSLLRRGCGEGKAEVDFIGRDGLRYRASWTVSRARGK
PGGRLQNAKQHLQLLPAGDDTQPAQTLNTTSNDAKALIIDRLGLNFEQFTRAVLLAQSEF
SAFLRANDNERSELLEKLTDTGHYSEISMAAHERERAAREAVNELERKLEGQLPASPQER
QALEEEVRLRQTAMTRLSEQHDALTTYHQWTTTAGELEQALRQAQQEQTEAHAASDGLSR
QREQLSALEALAPIRPALLRLTAIAPQHAQLVTQLAQLEQQLGALSPRVEQARAARHTAD
ERMQRCDTWRGEQLPKLEEARQVASRLAQQREAHASQQSEQQRLRDTLGQHQQELEAQDR
QRQQLEQQLQQLQATLVDESGRPLRDAEDYRDQLQRQRDALLELKPVLSEQISGLARRDE
VQQRLVELEQQLPRQQQALRDVAARQAQALQARDQARHEEDAERHQQEQERLARSDNVMA
LRRGLVQGEECPVCGSHEHPAAGQAAPAEALIAQLEQQARERLDQRRQATATAQQAMETA
SHEHARLEEQLGYLQQEQTQLHTELQRLQQQAQSCQTNLTELLARHSLSEQPQLEALPQL
PVAHALQLIEQRLGELDARQNTLVTTLRQLTPLREQRQALATRHATLTTQCQHGEAQLQQ
CETQITALASEIEQLSDTLAQQLSADPKRQHASVSDWSDWIESLTTRMRNEQEDARQALQ
ELSDQQQQLTQQQANLQQRQTELREEQDSLDRERVDWQTANPGLDDARIAELLAVEDHEL
QALRQQLRSAHERVARADALCEERNARQLTHWQAARTSSWQAALEQLAALEQLAAPAEET
SGAGIAGEGTAATEETGVIRAQAQQALALHARLQAHAQPPQEDAAGASEDAQPQPEEDTH
ALGEALATLITALKAPLTAVREAHQSAQAAILNDDQRRSGSAELGEQLARARAVHERWGA
LSELIGSASGAKFRTIAQAFNLERLIEHANLHLANLVRRYRLARGASPLGLVVVDTEMGD
ELRSVHSLSGGETFLVSLALALGLAGMASGELRIESLFIDEGFGSLDPDSLALAMEALDG
LQASGRRVGVISHVAEMHERIPVRIAVRPSGNGQSRLEIEG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccctgcgcctcgacaacctggcgtcgcttgccggcacgcatgaagtc
gacttcgagaaggcgccgctatccgatgccggcctgttcgccatcaccggccccactggg
gccggcaagagcacgctgctcgatgccctgtgtctggcgctctatggcaccacgccgcgc
ctgcgccagacgccgagtggcggtcagctggaggatgtcggcgagcatcagctgacgctc
aaggacccgcgcagcctgctccggcgtggctgcggcgaaggcaaggccgaggtggatttc
atcggccgcgatggcctgcgctatcgcgccagctggacggtcagccgcgcgcgcggcaag
cctggtgggcgcctgcagaatgccaagcaacatctccagctgctgcccgccggcgatgac
acccagccggctcagaccctcaacaccaccagcaatgacgccaaggcgttgatcatcgac
aggctggggctgaatttcgagcagttcacccgcgccgtgttgctggcgcagagcgagttc
agcgccttcctgcgtgccaatgacaatgaacgctcggagttgctggagaagctgaccgat
accggccattactccgagatctcgatggccgcccatgagcgcgagcgcgccgcccgcgag
gccgtcaatgaactggaacgcaagctggagggccagttaccagccagcccgcaggagcgc
caggcgctcgaggaggaggtgcgtctgcgtcagacggccatgacccggctcagcgaacag
catgatgcgctgacgacctatcaccagtggaccaccacggcgggcgagctcgaacaggct
ctgcgtcaggcgcagcaggagcagaccgaggctcacgccgccagcgatgggctttcccgt
cagcgcgagcaactcagcgccctggaggccctcgcgccgattcgtcctgccctgctgcgc
ctcacggcgatcgcgccgcagcatgcgcagctggtcacgcaactggcccagctggagcag
cagctcggcgccctgtcgcccagggttgagcaggccagagccgccaggcacaccgccgat
gaacgcatgcagcgctgtgatacctggcgtggcgagcaactgccgaaacttgaagaggca
cgtcaggtggcttcgcgtctggcgcaacaacgcgaagcacacgccagccagcagagtgaa
cagcaacgcctgcgcgacacgctcggccaacatcagcaggagctggaggctcaggatcgc
cagcgccagcagctggagcagcaactccagcagctgcaggcaacgctggtcgacgagtcc
ggccggccgctgcgcgatgccgaagactatcgtgaccagctgcaacgtcagcgcgatgca
ctactggagctcaagcccgtactcagcgagcagatcagtggtctggcccgccgtgatgag
gtgcagcagcgtcttgtcgagctggagcagcaactgccccgacagcaacaggcgttgcgg
gatgtggctgcccggcaggcgcaggccttgcaggcccgtgatcaggcgcgccacgaggaa
gacgccgagcgccaccagcaggagcaggagcgtctggcgcgcagcgacaacgtgatggcg
ctgcgccgtgggctggtccagggcgaggagtgtccggtgtgcggcagccacgagcacccc
gccgccggccaggccgcaccggccgaggcgctgatcgctcagctggagcagcaggctcgc
gagcgacttgaccagcgccgccaggccacggccaccgcgcagcaagccatggaaacggcc
agtcacgagcacgcccgcctcgaggagcagctcggctatctgcagcaggaacagactcag
ctgcacacggagctgcaacgcctgcagcagcaggcgcagagctgccagacaaacctgacc
gagcttctggcccggcattcgctgtcggagcagccccagcttgaagccttgccgcagctg
ccggttgcccacgcactgcaactgatcgagcagcgccttggggaactggacgcccgccag
aacacgctggtgacgacactgcgccagctgacgccgctgcgtgagcaacgccaggcactg
gcaacacgtcacgccacgctgacgacgcaatgccagcatggcgaggcgcagcttcaacag
tgcgagacgcagatcactgcgctggcgagtgagatcgagcagctcagtgacacgcttgcc
cagcagctgagcgcagaccccaagcgacagcatgccagcgtgagcgactggtctgactgg
atcgagtcgctgaccacccggatgcgcaacgagcaagaggatgcgcggcaggcactgcag
gaattgagcgaccagcaacagcagctgacgcagcagcaggccaatctgcagcaacgccag
acggagctgcgcgaagagcaagactcgctcgaccgcgaacgcgtggattggcagacagcg
aatcccggcctggatgacgcgcgcatcgcggagttgctggccgtcgaggatcacgagctg
caggcactgcgccagcaactgcgcagcgcccacgagcgcgtcgcacgcgcggatgccctg
tgtgaggagcgcaatgcgcgtcagctcacccactggcaggccgctcggacctccagttgg
caggcagcactcgagcagctggcagcactcgaacagctggcagcgcccgccgaggagacg
tcaggagcaggtatcgcgggagaaggcacggcggcaacggaagagacgggcgtcatccgc
gcccaggcccagcaggccctggcgctgcatgctcgcttgcaggctcatgcgcaacccccg
caagaagatgccgctggtgcgtcggaggatgcgcagccacagcccgaggaagacacccac
gcgcttggcgaggcgttggccactctgatcacggcgctcaaggcaccgctcactgccgtg
cgcgaggcccatcaatcggctcaggcggcgatactcaatgatgatcagcgccgcagtggc
agcgccgaacttggcgagcagctggcccgcgcccgcgcagtccatgaacgctggggcgcg
ctgtcggagctgatcggcagtgccagtggtgccaagttccgcaccatcgcccaggccttc
aacctcgagcgcctgatcgagcatgccaatctgcatctggccaatctggttcgccgctat
cgtctggcacgcggcgccagcccgctggggctggtggtggtggataccgagatgggtgac
gagctgcgcagcgtgcattcgctgtccggcggcgagaccttcctggtctcactggccctg
gcgctgggcctggcgggcatggcctccggtgagctgcgcatcgaatcgctgttcatcgat
gaaggcttcggtagcctcgacccggattcactggccctggcgatggaggcgttggatggc
ctgcaggccagcggccggcgcgtcggggtcatctcgcatgtggccgagatgcatgaacgc
attccggtgcgtatcgcggtgcgcccctcgggcaacggccagagccgactggagatcgag
ggctag
DBGET
integrated database retrieval system
