Cobetia sp. AM6: CLAM6_05160
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Entry
CLAM6_05160 CDS
T08724
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00020
Citrate cycle (TCA cycle)
cobe00190
Oxidative phosphorylation
cobe00650
Butanoate metabolism
cobe00720
Other carbon fixation pathways
cobe01100
Metabolic pathways
cobe01110
Biosynthesis of secondary metabolites
cobe01120
Microbial metabolism in diverse environments
cobe01200
Carbon metabolism
Module
cobe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cobe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cobe_M00149
Succinate dehydrogenase, prokaryotes
cobe_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CLAM6_05160 (sdhB)
00650 Butanoate metabolism
CLAM6_05160 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
CLAM6_05160 (sdhB)
00720 Other carbon fixation pathways
CLAM6_05160 (sdhB)
Enzymes [BR:
cobe01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CLAM6_05160 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_7
Fer4_9
Fer4_16
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
BBO55205
UniProt:
A0A5K7YBL4
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All DBs
Position
612422..613126
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AA seq
234 aa
AA seq
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MLQVSIYRYNPETDTAPYMQEFQVDTQGRDLMVLNVMEMLKEQDSSLAYRRSCREGVCGS
DGMNMNGKNGLTCVTALSEVVKDNKLVLRPLPGLPVVRDLVVDMSIFYKQYERIQPYLLN
DTPAPAIERLQSPEDRDKLDGLYECILCACCSTACPSFWWNPDKFVGPSGLLQAYRFLAD
SRDTATKERLSELDDPFAVFRCRGIMNCVAVCPKGLNPTRAIGKIRELLLANAT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggtatccatataccgctacaaccctgaaaccgatactgcgccgtacatgcag
gagtttcaggtcgacacccagggtcgtgacctgatggtgttgaacgtgatggaaatgctc
aaggaacaggacagctcgctggcctatcgtcgcagctgccgtgaaggtgtctgcggttcg
gacggcatgaacatgaacggcaagaacggcctgacctgtgtcaccgcgctgtccgaagtc
gtcaaggacaacaagctggtgctgcgtccgctgccgggcctgccggtcgtgcgtgacctg
gtcgtcgacatgagcatcttctacaagcagtacgagcgcatccagccgtacctgctcaac
gacacgccggcgccggccatcgagcgtctgcagtcgccggaagaccgtgacaagctcgac
ggtctctacgagtgcattctgtgtgcctgctgctcgactgcctgcccgtccttctggtgg
aacccggacaagttcgtcggtccgagcggtctgctgcaggcctatcgcttcctggcggac
tcgcgtgacaccgccaccaaggagcgtttgagcgagctggacgacccgtttgccgtattc
cgttgtcgcggaatcatgaattgtgtcgcggtttgccccaagggtctgaacccgacacgt
gccatcggcaagattcgtgagcttttgctggcaaacgccacttaa
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