Cobetia sp. AM6: CLAM6_05490
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Entry
CLAM6_05490 CDS
T08724
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00061
Fatty acid biosynthesis
cobe00071
Fatty acid degradation
cobe01100
Metabolic pathways
cobe01212
Fatty acid metabolism
cobe02024
Quorum sensing
cobe04146
Peroxisome
Module
cobe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CLAM6_05490
00071 Fatty acid degradation
CLAM6_05490
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CLAM6_05490
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLAM6_05490
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cobe01004
]
CLAM6_05490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cobe04147
]
CLAM6_05490
Enzymes [BR:
cobe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CLAM6_05490
Lipid biosynthesis proteins [BR:
cobe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CLAM6_05490
Exosome [BR:
cobe04147
]
Exosomal proteins
Exosomal proteins of breast milk
CLAM6_05490
Exosomal proteins of breast cancer cells
CLAM6_05490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BBO55238
UniProt:
A0A5K7Y2H7
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All DBs
Position
657191..658951
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AA seq
586 aa
AA seq
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MHDANPANASADPEADKASDHAGPVTGDANLIVSGEPLSGLEDYPSILEVFEASCANYAE
RPAFSCMDKTLSYADVDRLSRNFAAWLEHETGLEPGDRIAIQLPNLLQFPVAVFGALRAG
LVVVNTNPLYTEREMQHQFHDSGARAIVILANMADKLEKVLKRTDIEEVIITEIGDLHDF
PKRPLINLAVRYVKKMVPKYHLPDAHGLRDVLKRGAGLSHTRVTRQPVDIAALQYTGGTT
GVAKGTMLTHRNLVANMLQARGVISDVLNEGQEVLIAPLPVYHIYTFTVNCLYSMESGNH
SVLITNPRDIDGFIKTLARTPFTAFVGLNTLFSALCQRDDFKALDFSSLKLTISGGMALT
RSAAERWEAVTGCPIAEGYGMTETSPIVSFNPPRELQLGTIGKPVPGTELKVVDADGVTL
GRDAPGELCVRGPQVMKGYWQRDDATREAMDDEGFIRTGDIAVIQQDDFVRIVDRKKDMI
IVSGFNVFPNEIEDVVSGHPDIVEAAAVGVPDEQSGEAIKLFVVSSNPDLDRDSLRSWCK
EQLTGYKVPRFVEFRDELPKTNVGKVLRRELRDSEESAGNTPLREH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgccaatcctgccaacgcctcggcagacccggaagccgacaaggcgtctgat
cacgctggccccgtgaccggggacgccaacctgatcgtcagtggtgagccgttgtccggt
ctcgaggattacccctcgattctcgaggtcttcgaggccagctgcgccaactatgccgag
cgtccggccttcagctgcatggacaagacgctcagctacgccgatgtggaccgcctgtcg
cgcaatttcgccgcctggctggaacacgagaccggccttgagcccggtgatcgcatcgcc
attcagctgccgaatctgctgcagttcccggtggcggtattcggcgcgctgcgcgccggt
ctggtggtggtcaacaccaacccgctctacaccgagcgcgagatgcagcaccagttccat
gactccggcgcccgcgccatcgtgattctggccaacatggcggacaagctcgagaaggtg
ctcaagcgcaccgacatcgaggaggtcatcatcaccgagatcggtgacctgcatgacttc
cccaagcgtccgctgatcaacctggcggtgcgctacgtcaagaagatggtgccgaagtac
cacctgcccgacgcacacggcctacgtgacgtgctcaagcgcggggcggggctctcgcac
acgcgtgtcacgcgccagcccgtggacatcgccgcgctgcagtacaccggcggcaccacc
ggggttgccaagggcaccatgctgacccaccgcaatctggtcgccaacatgctgcaggcg
cgcggcgtgatcagtgatgtgctcaatgaaggccaggaggtgctgatcgcgccgctgccg
gtctatcacatctataccttcacggtgaattgcctctacagcatggagagcggcaaccac
agcgtgctgatcaccaatccgcgcgatatcgatggcttcatcaagacactggccaggaca
ccgttcaccgccttcgtcggcctcaacacgctgttctcggcgctgtgtcagcgtgatgac
ttcaaggcgctggacttctcgagtctcaagctgaccatctccggcggcatggcgctgacg
cgcagcgcggccgaacgctgggaagccgtcaccggctgcccgatcgccgagggctacggc
atgaccgagacctcgcccatcgtcagcttcaatccgccgcgcgagctgcagctgggcacc
atcggcaagccggtgccgggcaccgagctcaaggtggtggacgccgatggcgtgacgctg
gggcgtgatgcgccgggcgagctgtgcgtgcgcggcccccaggtgatgaagggttactgg
cagcgtgacgacgccacgcgagaggcgatggatgacgagggcttcatccgcaccggcgat
atcgcggtcatccagcaagatgacttcgtgcgcatcgtcgatcgcaagaaggacatgatc
atcgtctccggcttcaatgtgttccccaacgagatcgaggacgtggtcagcggccatccg
gatatcgtcgaggcggcagcagtgggcgtgccggacgagcagagcggcgaggcgatcaag
ctgttcgtggtctcaagcaacccggatctggatcgcgacagcctgcgcagctggtgcaag
gagcagctgaccggctacaaggtgccgcgcttcgtcgaattccgcgatgaactgcccaag
accaacgtcggcaaggtgctgcgccgtgagctgcgcgacagcgaagagagcgctggcaat
acgccgctacgcgagcactga
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