Cobetia sp. AM6: CLAM6_05620
Help
Entry
CLAM6_05620 CDS
T08724
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_05620
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CLAM6_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_4
HTH_Tnp_1_2
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
BBO55251
UniProt:
A0A5K7Y1C0
LinkDB
All DBs
Position
676364..676984
Genome browser
AA seq
206 aa
AA seq
DB search
MNVATASPRRKELVRIAARLFVEEGFDRTTVRMLAQEMGIKSGSLFHHFADKQEILCAVI
EEGMFSALAIAREHLARCEPYQASEVTASAASQQQQARERLLALARAHLDTLLTDRNAHV
VALYEWRRLEGLAREHLVQLRDDYEDLWRDAIASAVSAGLLKGDAALLRQFMLGALNWTV
RWYRPEGERSPDELAEALVDSLCRLS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagccaccgcctcaccccgtcgcaaggagctggtccgtatcgctgcccgcctg
ttcgtcgaggagggtttcgatcgcaccaccgtccgcatgctggcccaggaaatgggcatc
aagtccggcagtctcttccatcacttcgccgacaagcaggaaattctgtgcgccgtgatc
gaagagggcatgttcagtgcgctggccatcgcccgtgagcatctggcgcgctgcgagccg
taccaggcaagcgaagtgaccgcctcggcggcgtcgcagcagcagcaggcgcgtgagcga
ctgctggccctggcgcgtgcacatctggacacgctgctaaccgatcgcaatgcccatgtg
gtcgcgctctatgagtggcggcggctggagggcctggcgcgcgagcatctcgtccagctg
cgcgatgactacgaagacctgtggcgtgacgccatcgcctccgccgtgtccgcagggctg
ctcaagggcgacgccgcgctgctgcgccagttcatgctcggcgcgctcaactggacggta
cgctggtatcgccccgagggagagcgctcccccgatgagctggccgaggcgctggtcgac
agcctgtgtcgtctgtcctga
DBGET
integrated database retrieval system
