Cobetia sp. AM6: CLAM6_05980
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Entry
CLAM6_05980 CDS
T08724
Symbol
slyA_1
Name
(GenBank) transcriptional regulator SlyA
KO
K06075
MarR family transcriptional regulator, transcriptional regulator for hemolysin
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_05980 (slyA_1)
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
MarR family
CLAM6_05980 (slyA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MarR
MarR_2
HTH_27
HTH_Crp_2
HTH_5
B-block_TFIIIC
HVO_A0261_N
HTH_IclR
HxlR
Staph_reg_Sar_Rot
TrmB
HTH_20
WHD_F93
WHD_ArnR1
Fe_dep_repress
DnaD_N
HTH_67
HTH_47
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
BBO55287
LinkDB
All DBs
Position
complement(724384..724830)
Genome browser
AA seq
148 aa
AA seq
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MHEDIGLKLSRLPRLWRAILDQRLSPLGLTQTRWMTLVHLWRMGDGQPQCDLARSIGIEA
PSLVRTLDQLTEQGLVERRACEEDRRTKRIFLTRKALPLIEKIDAIAEQTRIEMLEGLSE
AQVDQFCECLRVMERNGLEISEKVPESA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagatatcggactcaagctttcccgcctgccgcgcctgtggcgcgccattctg
gaccagcgactgtccccactagggctgacccagactcgctggatgacgctggtacacctg
tggcgcatgggcgatggtcagccccaatgtgatctggctcgctccatcggtatcgaagcc
ccgtcgctggttcgcaccctggaccaactgaccgaacagggcctggtcgagcgccgtgcc
tgcgaggaagaccgccgcaccaagcgcatcttcctgacccgcaaggcgctgccactgatc
gagaagatcgatgccatcgccgagcagactcgcatcgagatgctcgagggcctgagcgag
gcgcaggtcgatcaattctgtgaatgcctgcgcgtcatggagcgcaatggcctggaaatc
tccgagaaggtgccggagagcgcctga
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integrated database retrieval system
